Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHRNA1P02708 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRNA1P02708 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.17■□□□□ 0.98
CHRNA1P02708 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.17■□□□□ 0.98
CHRNA1P02708 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.17■□□□□ 0.98
CHRNA1P02708 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.17■□□□□ 0.98
CHRNA1P02708 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.17■□□□□ 0.98
CHRNA1P02708 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.17■□□□□ 0.98
CHRNA1P02708 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.17■□□□□ 0.98
CHRNA1P02708 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
CHRNA1P02708 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRNA1P02708 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRNA1P02708 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CHRNA1P02708 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRNA1P02708 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.17■□□□□ 0.98
CHRNA1P02708 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA1P02708 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA1P02708 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA1P02708 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.16■□□□□ 0.98
CHRNA1P02708 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
CHRNA1P02708 AP003041.3-201ENST00000527151 707 ntBASIC21.16■□□□□ 0.98
CHRNA1P02708 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.16■□□□□ 0.98
CHRNA1P02708 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.16■□□□□ 0.98
CHRNA1P02708 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.16■□□□□ 0.98
CHRNA1P02708 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CHRNA1P02708 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
CHRNA1P02708 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.16■□□□□ 0.98
CHRNA1P02708 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA1P02708 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.16■□□□□ 0.98
CHRNA1P02708 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.16■□□□□ 0.98
CHRNA1P02708 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNA1P02708 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.15■□□□□ 0.98
CHRNA1P02708 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA1P02708 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA1P02708 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA1P02708 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.15■□□□□ 0.98
CHRNA1P02708 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA1P02708 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA1P02708 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
CHRNA1P02708 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA1P02708 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.15■□□□□ 0.98
CHRNA1P02708 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.15■□□□□ 0.98
CHRNA1P02708 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA1P02708 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CHRNA1P02708 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.15■□□□□ 0.98
CHRNA1P02708 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA1P02708 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA1P02708 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA1P02708 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CHRNA1P02708 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CHRNA1P02708 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNA1P02708 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.14■□□□□ 0.98
CHRNA1P02708 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNA1P02708 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNA1P02708 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNA1P02708 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.14■□□□□ 0.97
CHRNA1P02708 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.14■□□□□ 0.97
CHRNA1P02708 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.14■□□□□ 0.97
CHRNA1P02708 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.14■□□□□ 0.97
CHRNA1P02708 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNA1P02708 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNA1P02708 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNA1P02708 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA1P02708 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.13■□□□□ 0.97
CHRNA1P02708 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA1P02708 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.13■□□□□ 0.97
CHRNA1P02708 KRT8P11-201ENST00000409686 1436 ntBASIC21.13■□□□□ 0.97
CHRNA1P02708 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CHRNA1P02708 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
CHRNA1P02708 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA1P02708 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA1P02708 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CHRNA1P02708 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA1P02708 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA1P02708 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA1P02708 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA1P02708 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA1P02708 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA1P02708 AC091076.1-201ENST00000610741 619 ntBASIC21.13■□□□□ 0.97
CHRNA1P02708 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.13■□□□□ 0.97
CHRNA1P02708 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA1P02708 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.13■□□□□ 0.97
CHRNA1P02708 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.13■□□□□ 0.97
CHRNA1P02708 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA1P02708 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CHRNA1P02708 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA1P02708 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CHRNA1P02708 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CHRNA1P02708 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNA1P02708 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
CHRNA1P02708 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.12■□□□□ 0.97
CHRNA1P02708 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNA1P02708 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CHRNA1P02708 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.12■□□□□ 0.97
CHRNA1P02708 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.12■□□□□ 0.97
CHRNA1P02708 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNA1P02708 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNA1P02708 UPK3BP1-201ENST00000428678 509 ntBASIC21.12■□□□□ 0.97
CHRNA1P02708 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNA1P02708 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms