Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CD4P01730 CA15P1-201ENST00000481698 905 ntBASIC21.49■■□□□ 1.03
CD4P01730 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CD4P01730 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.49■■□□□ 1.03
CD4P01730 AL441883.1-201ENST00000566170 1045 ntBASIC21.49■■□□□ 1.03
CD4P01730 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.49■■□□□ 1.03
CD4P01730 AC116407.4-201ENST00000623319 1061 ntBASIC21.49■■□□□ 1.03
CD4P01730 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.49■■□□□ 1.03
CD4P01730 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CD4P01730 AC020907.5-201ENST00000624372 1936 ntBASIC21.49■■□□□ 1.03
CD4P01730 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CD4P01730 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CD4P01730 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.48■■□□□ 1.03
CD4P01730 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.48■■□□□ 1.03
CD4P01730 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CD4P01730 AL671277.2-201ENST00000458060 996 ntBASIC21.48■■□□□ 1.03
CD4P01730 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.48■■□□□ 1.03
CD4P01730 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.48■■□□□ 1.03
CD4P01730 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.48■■□□□ 1.03
CD4P01730 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.48■■□□□ 1.03
CD4P01730 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.48■■□□□ 1.03
CD4P01730 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.48■■□□□ 1.03
CD4P01730 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CD4P01730 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CD4P01730 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.48■■□□□ 1.03
CD4P01730 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CD4P01730 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CD4P01730 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CD4P01730 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CD4P01730 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CD4P01730 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.47■■□□□ 1.03
CD4P01730 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.47■■□□□ 1.03
CD4P01730 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.47■■□□□ 1.03
CD4P01730 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.47■■□□□ 1.03
CD4P01730 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.47■■□□□ 1.03
CD4P01730 AL359075.1-203ENST00000462729 1002 ntBASIC21.47■■□□□ 1.03
CD4P01730 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CD4P01730 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.47■■□□□ 1.03
CD4P01730 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.47■■□□□ 1.03
CD4P01730 AC008622.2-201ENST00000617006 1229 ntBASIC21.47■■□□□ 1.03
CD4P01730 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
CD4P01730 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CD4P01730 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CD4P01730 AC005332.1-201ENST00000577698 1310 ntBASIC21.47■■□□□ 1.03
CD4P01730 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.47■■□□□ 1.03
CD4P01730 KRT8P8-201ENST00000434750 1448 ntBASIC21.46■■□□□ 1.03
CD4P01730 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CD4P01730 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CD4P01730 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CD4P01730 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CD4P01730 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CD4P01730 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CD4P01730 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.46■■□□□ 1.03
CD4P01730 PRSS44-201ENST00000515154 1146 ntBASIC21.46■■□□□ 1.03
CD4P01730 AL023973.1-201ENST00000624619 620 ntBASIC21.46■■□□□ 1.03
CD4P01730 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CD4P01730 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CD4P01730 CLDN5-201ENST00000403084 2357 ntBASIC21.46■■□□□ 1.03
CD4P01730 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CD4P01730 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CD4P01730 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CD4P01730 SMG8-203ENST00000578922 2178 ntBASIC21.46■■□□□ 1.03
CD4P01730 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.45■■□□□ 1.03
CD4P01730 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CD4P01730 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD4P01730 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CD4P01730 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.45■■□□□ 1.02
CD4P01730 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD4P01730 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD4P01730 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CD4P01730 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.45■■□□□ 1.02
CD4P01730 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CD4P01730 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CD4P01730 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.45■■□□□ 1.02
CD4P01730 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD4P01730 AC093458.2-201ENST00000623150 629 ntBASIC21.45■■□□□ 1.02
CD4P01730 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD4P01730 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD4P01730 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD4P01730 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CD4P01730 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CD4P01730 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD4P01730 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CD4P01730 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD4P01730 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CD4P01730 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD4P01730 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD4P01730 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CD4P01730 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CD4P01730 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CD4P01730 KRT18P38-201ENST00000449496 1282 ntBASIC21.44■■□□□ 1.02
CD4P01730 AC140113.3-201ENST00000605663 199 ntBASIC21.44■■□□□ 1.02
CD4P01730 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD4P01730 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD4P01730 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CD4P01730 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD4P01730 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD4P01730 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD4P01730 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CD4P01730 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms