Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTN3O95197 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN3O95197 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTN3O95197 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RTN3O95197 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.46■□□□□ 0.87
RTN3O95197 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN3O95197 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN3O95197 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RTN3O95197 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN3O95197 TSPY15P-201ENST00000457163 923 ntBASIC20.46■□□□□ 0.87
RTN3O95197 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTN3O95197 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.46■□□□□ 0.87
RTN3O95197 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.46■□□□□ 0.87
RTN3O95197 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.46■□□□□ 0.87
RTN3O95197 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
RTN3O95197 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RTN3O95197 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.46■□□□□ 0.87
RTN3O95197 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.46■□□□□ 0.87
RTN3O95197 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN3O95197 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTN3O95197 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTN3O95197 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTN3O95197 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTN3O95197 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RTN3O95197 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.87
RTN3O95197 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN3O95197 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN3O95197 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN3O95197 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN3O95197 FSCN1P1-201ENST00000568912 1481 ntBASIC20.45■□□□□ 0.86
RTN3O95197 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN3O95197 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
RTN3O95197 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.45■□□□□ 0.86
RTN3O95197 UNC93B2-201ENST00000285383 730 ntBASIC20.45■□□□□ 0.86
RTN3O95197 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTN3O95197 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RTN3O95197 AC004980.1-204ENST00000429707 299 ntBASIC20.45■□□□□ 0.86
RTN3O95197 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN3O95197 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.45■□□□□ 0.86
RTN3O95197 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.45■□□□□ 0.86
RTN3O95197 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.45■□□□□ 0.86
RTN3O95197 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.45■□□□□ 0.86
RTN3O95197 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.45■□□□□ 0.86
RTN3O95197 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RTN3O95197 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN3O95197 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.45■□□□□ 0.86
RTN3O95197 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTN3O95197 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN3O95197 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTN3O95197 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
RTN3O95197 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTN3O95197 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.44■□□□□ 0.86
RTN3O95197 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.44■□□□□ 0.86
RTN3O95197 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN3O95197 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN3O95197 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RTN3O95197 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RTN3O95197 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
RTN3O95197 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTN3O95197 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN3O95197 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.44■□□□□ 0.86
RTN3O95197 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTN3O95197 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RTN3O95197 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN3O95197 RBM17P1-201ENST00000453646 1190 ntBASIC20.44■□□□□ 0.86
RTN3O95197 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.44■□□□□ 0.86
RTN3O95197 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.44■□□□□ 0.86
RTN3O95197 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RTN3O95197 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN3O95197 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTN3O95197 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTN3O95197 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTN3O95197 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTN3O95197 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
RTN3O95197 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.44■□□□□ 0.86
RTN3O95197 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN3O95197 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RTN3O95197 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN3O95197 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN3O95197 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RTN3O95197 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN3O95197 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RTN3O95197 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN3O95197 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN3O95197 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN3O95197 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN3O95197 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN3O95197 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN3O95197 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.43■□□□□ 0.86
RTN3O95197 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.43■□□□□ 0.86
RTN3O95197 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN3O95197 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTN3O95197 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
RTN3O95197 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RTN3O95197 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.43■□□□□ 0.86
RTN3O95197 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTN3O95197 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RTN3O95197 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN3O95197 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.42■□□□□ 0.86
RTN3O95197 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms