Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.44■□□□□ 0.86
BEST1O76090 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.44■□□□□ 0.86
BEST1O76090 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.44■□□□□ 0.86
BEST1O76090 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.44■□□□□ 0.86
BEST1O76090 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
BEST1O76090 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.44■□□□□ 0.86
BEST1O76090 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.44■□□□□ 0.86
BEST1O76090 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.44■□□□□ 0.86
BEST1O76090 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
BEST1O76090 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BEST1O76090 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BEST1O76090 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
BEST1O76090 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BEST1O76090 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BEST1O76090 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
BEST1O76090 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.43■□□□□ 0.86
BEST1O76090 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.43■□□□□ 0.86
BEST1O76090 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.43■□□□□ 0.86
BEST1O76090 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.43■□□□□ 0.86
BEST1O76090 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
BEST1O76090 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.43■□□□□ 0.86
BEST1O76090 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
BEST1O76090 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.43■□□□□ 0.86
BEST1O76090 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
BEST1O76090 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BEST1O76090 RBM17P1-201ENST00000453646 1190 ntBASIC20.43■□□□□ 0.86
BEST1O76090 B3GAT3P1-201ENST00000471720 806 ntBASIC20.43■□□□□ 0.86
BEST1O76090 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.43■□□□□ 0.86
BEST1O76090 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
BEST1O76090 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.43■□□□□ 0.86
BEST1O76090 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.43■□□□□ 0.86
BEST1O76090 AL160286.2-201ENST00000567150 934 ntBASIC20.43■□□□□ 0.86
BEST1O76090 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
BEST1O76090 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
BEST1O76090 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
BEST1O76090 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
BEST1O76090 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BEST1O76090 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
BEST1O76090 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
BEST1O76090 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
BEST1O76090 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.43■□□□□ 0.86
BEST1O76090 AC079598.2-202ENST00000546624 1451 ntBASIC20.43■□□□□ 0.86
BEST1O76090 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.43■□□□□ 0.86
BEST1O76090 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BEST1O76090 AC104417.2-201ENST00000562989 1793 ntBASIC20.42■□□□□ 0.86
BEST1O76090 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BEST1O76090 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
BEST1O76090 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BEST1O76090 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
BEST1O76090 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.42■□□□□ 0.86
BEST1O76090 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.42■□□□□ 0.86
BEST1O76090 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
BEST1O76090 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
BEST1O76090 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
BEST1O76090 BX088651.1-201ENST00000540551 451 ntBASIC20.42■□□□□ 0.86
BEST1O76090 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.42■□□□□ 0.86
BEST1O76090 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.42■□□□□ 0.86
BEST1O76090 MIR6786-201ENST00000616843 113 ntBASIC20.42■□□□□ 0.86
BEST1O76090 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.42■□□□□ 0.86
BEST1O76090 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
BEST1O76090 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BEST1O76090 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.42■□□□□ 0.86
BEST1O76090 RCC2P6-201ENST00000526625 1557 ntBASIC20.42■□□□□ 0.86
BEST1O76090 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
BEST1O76090 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST1O76090 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST1O76090 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST1O76090 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST1O76090 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST1O76090 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.41■□□□□ 0.86
BEST1O76090 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BEST1O76090 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
BEST1O76090 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST1O76090 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.41■□□□□ 0.86
BEST1O76090 AC026271.3-201ENST00000571884 352 ntBASIC20.41■□□□□ 0.86
BEST1O76090 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BEST1O76090 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.41■□□□□ 0.86
BEST1O76090 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST1O76090 ZNF815P-204ENST00000434898 1737 ntBASIC20.41■□□□□ 0.86
BEST1O76090 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST1O76090 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST1O76090 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
BEST1O76090 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.41■□□□□ 0.86
BEST1O76090 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
BEST1O76090 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BEST1O76090 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
BEST1O76090 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.4■□□□□ 0.86
BEST1O76090 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.4■□□□□ 0.86
BEST1O76090 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
BEST1O76090 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
BEST1O76090 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BEST1O76090 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
BEST1O76090 AP000525.1-201ENST00000608286 694 ntBASIC20.4■□□□□ 0.86
BEST1O76090 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.4■□□□□ 0.86
BEST1O76090 AC130371.2-201ENST00000619443 611 ntBASIC20.4■□□□□ 0.86
BEST1O76090 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.4■□□□□ 0.86
BEST1O76090 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
BEST1O76090 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
BEST1O76090 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
BEST1O76090 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms