Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.36■□□□□ 0.37
CYTIPO60759 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.36■□□□□ 0.37
CYTIPO60759 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.36■□□□□ 0.37
CYTIPO60759 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYTIPO60759 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CYTIPO60759 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYTIPO60759 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CYTIPO60759 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CYTIPO60759 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CYTIPO60759 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.35■□□□□ 0.37
CYTIPO60759 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.35■□□□□ 0.37
CYTIPO60759 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CYTIPO60759 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.35■□□□□ 0.37
CYTIPO60759 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.35■□□□□ 0.37
CYTIPO60759 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.35■□□□□ 0.37
CYTIPO60759 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CYTIPO60759 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.35■□□□□ 0.37
CYTIPO60759 AC073195.1-201ENST00000607241 877 ntBASIC17.35■□□□□ 0.37
CYTIPO60759 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CYTIPO60759 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.35■□□□□ 0.37
CYTIPO60759 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CYTIPO60759 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CYTIPO60759 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CYTIPO60759 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CYTIPO60759 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CYTIPO60759 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CYTIPO60759 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.35■□□□□ 0.37
CYTIPO60759 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CYTIPO60759 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CYTIPO60759 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.35■□□□□ 0.37
CYTIPO60759 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.35■□□□□ 0.37
CYTIPO60759 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYTIPO60759 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYTIPO60759 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYTIPO60759 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYTIPO60759 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYTIPO60759 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYTIPO60759 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.34■□□□□ 0.37
CYTIPO60759 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.34■□□□□ 0.37
CYTIPO60759 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYTIPO60759 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYTIPO60759 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CYTIPO60759 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYTIPO60759 KSR1P1-201ENST00000446298 240 ntBASIC17.34■□□□□ 0.37
CYTIPO60759 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYTIPO60759 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.34■□□□□ 0.37
CYTIPO60759 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.34■□□□□ 0.37
CYTIPO60759 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.34■□□□□ 0.37
CYTIPO60759 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CYTIPO60759 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CYTIPO60759 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYTIPO60759 AL049637.2-201ENST00000641778 930 ntBASIC17.34■□□□□ 0.37
CYTIPO60759 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYTIPO60759 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYTIPO60759 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CYTIPO60759 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CYTIPO60759 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.33■□□□□ 0.37
CYTIPO60759 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CYTIPO60759 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.33■□□□□ 0.37
CYTIPO60759 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CYTIPO60759 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CYTIPO60759 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
CYTIPO60759 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CYTIPO60759 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.33■□□□□ 0.36
CYTIPO60759 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CYTIPO60759 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CYTIPO60759 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CYTIPO60759 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.33■□□□□ 0.36
CYTIPO60759 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CYTIPO60759 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CYTIPO60759 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.33■□□□□ 0.36
CYTIPO60759 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.33■□□□□ 0.36
CYTIPO60759 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.33■□□□□ 0.36
CYTIPO60759 AL445675.2-201ENST00000620291 557 ntBASIC17.33■□□□□ 0.36
CYTIPO60759 AC125437.2-201ENST00000625180 2167 ntBASIC17.33■□□□□ 0.36
CYTIPO60759 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CYTIPO60759 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.33■□□□□ 0.36
CYTIPO60759 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CYTIPO60759 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CYTIPO60759 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.33■□□□□ 0.36
CYTIPO60759 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYTIPO60759 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYTIPO60759 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.32■□□□□ 0.36
CYTIPO60759 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYTIPO60759 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYTIPO60759 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYTIPO60759 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CYTIPO60759 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYTIPO60759 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.32■□□□□ 0.36
CYTIPO60759 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYTIPO60759 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CYTIPO60759 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYTIPO60759 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYTIPO60759 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CYTIPO60759 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.32■□□□□ 0.36
CYTIPO60759 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.32■□□□□ 0.36
CYTIPO60759 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.32■□□□□ 0.36
CYTIPO60759 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.32■□□□□ 0.36
CYTIPO60759 AC113410.3-201ENST00000623366 203 ntBASIC17.32■□□□□ 0.36
CYTIPO60759 HLA-A-209ENST00000638375 975 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms