Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HCN1O60741 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HCN1O60741 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCN1O60741 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.15■□□□□ 0.5
HCN1O60741 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.15■□□□□ 0.5
HCN1O60741 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HCN1O60741 AC133681.1-201ENST00000465482 601 ntBASIC18.15■□□□□ 0.5
HCN1O60741 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.15■□□□□ 0.5
HCN1O60741 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
HCN1O60741 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HCN1O60741 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.15■□□□□ 0.5
HCN1O60741 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.15■□□□□ 0.5
HCN1O60741 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.15■□□□□ 0.5
HCN1O60741 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.15■□□□□ 0.5
HCN1O60741 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCN1O60741 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCN1O60741 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.15■□□□□ 0.5
HCN1O60741 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HCN1O60741 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HCN1O60741 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCN1O60741 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
HCN1O60741 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCN1O60741 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
HCN1O60741 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCN1O60741 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCN1O60741 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
HCN1O60741 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HCN1O60741 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HCN1O60741 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HCN1O60741 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.14■□□□□ 0.5
HCN1O60741 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.14■□□□□ 0.49
HCN1O60741 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HCN1O60741 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HCN1O60741 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HCN1O60741 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HCN1O60741 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HCN1O60741 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.14■□□□□ 0.49
HCN1O60741 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HCN1O60741 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
HCN1O60741 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.14■□□□□ 0.49
HCN1O60741 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HCN1O60741 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.14■□□□□ 0.49
HCN1O60741 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HCN1O60741 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HCN1O60741 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.14■□□□□ 0.49
HCN1O60741 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.14■□□□□ 0.49
HCN1O60741 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.14■□□□□ 0.49
HCN1O60741 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.14■□□□□ 0.49
HCN1O60741 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.14■□□□□ 0.49
HCN1O60741 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HCN1O60741 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HCN1O60741 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.14■□□□□ 0.49
HCN1O60741 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
HCN1O60741 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HCN1O60741 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HCN1O60741 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HCN1O60741 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
HCN1O60741 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HCN1O60741 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
HCN1O60741 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HCN1O60741 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.14■□□□□ 0.49
HCN1O60741 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.14■□□□□ 0.49
HCN1O60741 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.13■□□□□ 0.49
HCN1O60741 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HCN1O60741 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HCN1O60741 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HCN1O60741 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.13■□□□□ 0.49
HCN1O60741 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HCN1O60741 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.13■□□□□ 0.49
HCN1O60741 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HCN1O60741 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HCN1O60741 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HCN1O60741 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HCN1O60741 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.13■□□□□ 0.49
HCN1O60741 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.13■□□□□ 0.49
HCN1O60741 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
HCN1O60741 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.13■□□□□ 0.49
HCN1O60741 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HCN1O60741 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HCN1O60741 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HCN1O60741 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HCN1O60741 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HCN1O60741 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.12■□□□□ 0.49
HCN1O60741 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HCN1O60741 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HCN1O60741 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HCN1O60741 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HCN1O60741 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HCN1O60741 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.12■□□□□ 0.49
HCN1O60741 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HCN1O60741 HLA-G-202ENST00000376815 851 ntBASIC18.12■□□□□ 0.49
HCN1O60741 HLA-G-203ENST00000376818 1127 ntBASIC18.12■□□□□ 0.49
HCN1O60741 AC239809.2-201ENST00000415381 517 ntBASIC18.12■□□□□ 0.49
HCN1O60741 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.12■□□□□ 0.49
HCN1O60741 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.12■□□□□ 0.49
HCN1O60741 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HCN1O60741 PRKY-204ENST00000533551 1019 ntBASIC18.12■□□□□ 0.49
HCN1O60741 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.12■□□□□ 0.49
HCN1O60741 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HCN1O60741 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms