Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SSSCA1O60232 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.85■□□□□ 0.13
SSSCA1O60232 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSSCA1O60232 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SSSCA1O60232 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.85■□□□□ 0.13
SSSCA1O60232 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SSSCA1O60232 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.85■□□□□ 0.13
SSSCA1O60232 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.85■□□□□ 0.13
SSSCA1O60232 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SSSCA1O60232 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SSSCA1O60232 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSSCA1O60232 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSSCA1O60232 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSSCA1O60232 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSSCA1O60232 AC019069.1-201ENST00000610008 1333 ntBASIC15.85■□□□□ 0.13
SSSCA1O60232 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SSSCA1O60232 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SSSCA1O60232 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SSSCA1O60232 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
SSSCA1O60232 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSSCA1O60232 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SSSCA1O60232 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SSSCA1O60232 CYP21A1P-202ENST00000354927 1481 ntBASIC15.84■□□□□ 0.13
SSSCA1O60232 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
SSSCA1O60232 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SSSCA1O60232 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.84■□□□□ 0.13
SSSCA1O60232 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
SSSCA1O60232 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.84■□□□□ 0.13
SSSCA1O60232 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.84■□□□□ 0.13
SSSCA1O60232 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.84■□□□□ 0.13
SSSCA1O60232 SLC7A5P1-201ENST00000568957 537 ntBASIC15.84■□□□□ 0.13
SSSCA1O60232 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SSSCA1O60232 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SSSCA1O60232 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.84■□□□□ 0.13
SSSCA1O60232 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.84■□□□□ 0.13
SSSCA1O60232 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SSSCA1O60232 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SSSCA1O60232 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.84■□□□□ 0.13
SSSCA1O60232 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SSSCA1O60232 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSSCA1O60232 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SSSCA1O60232 PHGDH-210ENST00000641115 1638 ntBASIC15.83■□□□□ 0.13
SSSCA1O60232 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.83■□□□□ 0.13
SSSCA1O60232 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SSSCA1O60232 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSSCA1O60232 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSSCA1O60232 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.83■□□□□ 0.12
SSSCA1O60232 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.83■□□□□ 0.12
SSSCA1O60232 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SSSCA1O60232 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.83■□□□□ 0.12
SSSCA1O60232 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SSSCA1O60232 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.83■□□□□ 0.12
SSSCA1O60232 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.83■□□□□ 0.12
SSSCA1O60232 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SSSCA1O60232 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.83■□□□□ 0.12
SSSCA1O60232 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.83■□□□□ 0.12
SSSCA1O60232 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SSSCA1O60232 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.83■□□□□ 0.12
SSSCA1O60232 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.83■□□□□ 0.12
SSSCA1O60232 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSSCA1O60232 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
SSSCA1O60232 AC135050.7-201ENST00000624508 2218 ntBASIC15.83■□□□□ 0.12
SSSCA1O60232 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSSCA1O60232 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SSSCA1O60232 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.83■□□□□ 0.12
SSSCA1O60232 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSSCA1O60232 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.83■□□□□ 0.12
SSSCA1O60232 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SSSCA1O60232 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSSCA1O60232 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSSCA1O60232 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
SSSCA1O60232 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSSCA1O60232 OR6D1P-202ENST00000641007 5290 ntBASIC15.82■□□□□ 0.12
SSSCA1O60232 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSSCA1O60232 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SSSCA1O60232 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.82■□□□□ 0.12
SSSCA1O60232 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSSCA1O60232 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSSCA1O60232 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.82■□□□□ 0.12
SSSCA1O60232 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSSCA1O60232 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms