Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB2O43679 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
LDB2O43679 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB2O43679 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDB2O43679 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.44■□□□□ 0.7
LDB2O43679 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LDB2O43679 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB2O43679 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB2O43679 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LDB2O43679 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB2O43679 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.43■□□□□ 0.7
LDB2O43679 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LDB2O43679 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.43■□□□□ 0.7
LDB2O43679 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.43■□□□□ 0.7
LDB2O43679 C1QL1P1-201ENST00000568105 661 ntBASIC19.43■□□□□ 0.7
LDB2O43679 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.43■□□□□ 0.7
LDB2O43679 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.43■□□□□ 0.7
LDB2O43679 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB2O43679 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LDB2O43679 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB2O43679 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.43■□□□□ 0.7
LDB2O43679 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LDB2O43679 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.43■□□□□ 0.7
LDB2O43679 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB2O43679 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LDB2O43679 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB2O43679 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB2O43679 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.43■□□□□ 0.7
LDB2O43679 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.43■□□□□ 0.7
LDB2O43679 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LDB2O43679 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
LDB2O43679 SDHAP1-207ENST00000440850 2000 ntBASIC19.42■□□□□ 0.7
LDB2O43679 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.42■□□□□ 0.7
LDB2O43679 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LDB2O43679 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.42■□□□□ 0.7
LDB2O43679 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDB2O43679 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LDB2O43679 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDB2O43679 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LDB2O43679 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.42■□□□□ 0.7
LDB2O43679 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LDB2O43679 KRT18P29-201ENST00000397031 1267 ntBASIC19.42■□□□□ 0.7
LDB2O43679 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.42■□□□□ 0.7
LDB2O43679 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.42■□□□□ 0.7
LDB2O43679 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.42■□□□□ 0.7
LDB2O43679 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDB2O43679 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LDB2O43679 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDB2O43679 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDB2O43679 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LDB2O43679 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.42■□□□□ 0.7
LDB2O43679 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.42■□□□□ 0.7
LDB2O43679 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LDB2O43679 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB2O43679 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB2O43679 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.41■□□□□ 0.7
LDB2O43679 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LDB2O43679 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB2O43679 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.41■□□□□ 0.7
LDB2O43679 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LDB2O43679 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB2O43679 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB2O43679 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LDB2O43679 KRT16P5-201ENST00000455284 522 ntBASIC19.41■□□□□ 0.7
LDB2O43679 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LDB2O43679 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LDB2O43679 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.41■□□□□ 0.7
LDB2O43679 AC110285.5-201ENST00000611501 352 ntBASIC19.41■□□□□ 0.7
LDB2O43679 ITM2C-210ENST00000620962 501 ntBASIC19.41■□□□□ 0.7
LDB2O43679 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.41■□□□□ 0.7
LDB2O43679 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.41■□□□□ 0.7
LDB2O43679 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.41■□□□□ 0.7
LDB2O43679 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB2O43679 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB2O43679 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.41■□□□□ 0.7
LDB2O43679 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.41■□□□□ 0.7
LDB2O43679 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB2O43679 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDB2O43679 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.4■□□□□ 0.7
LDB2O43679 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB2O43679 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB2O43679 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.4■□□□□ 0.7
LDB2O43679 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.4■□□□□ 0.7
LDB2O43679 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB2O43679 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.4■□□□□ 0.7
LDB2O43679 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB2O43679 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LDB2O43679 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LDB2O43679 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB2O43679 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB2O43679 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LDB2O43679 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.4■□□□□ 0.7
LDB2O43679 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB2O43679 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB2O43679 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB2O43679 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.4■□□□□ 0.7
LDB2O43679 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB2O43679 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LDB2O43679 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LDB2O43679 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms