Protein–RNA interactions for Protein: O43464

HTRA2, Serine protease HTRA2, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2O43464 NIFKP9-201ENST00000419265 221 ntBASIC19.63■□□□□ 0.73
HTRA2O43464 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HTRA2O43464 AC093827.2-201ENST00000512654 315 ntBASIC19.63■□□□□ 0.73
HTRA2O43464 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.63■□□□□ 0.73
HTRA2O43464 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.63■□□□□ 0.73
HTRA2O43464 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.63■□□□□ 0.73
HTRA2O43464 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTRA2O43464 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HTRA2O43464 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTRA2O43464 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.62■□□□□ 0.73
HTRA2O43464 TREX1-205ENST00000625293 1783 ntBASIC19.62■□□□□ 0.73
HTRA2O43464 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTRA2O43464 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HTRA2O43464 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.62■□□□□ 0.73
HTRA2O43464 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
HTRA2O43464 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTRA2O43464 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTRA2O43464 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.62■□□□□ 0.73
HTRA2O43464 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HTRA2O43464 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.62■□□□□ 0.73
HTRA2O43464 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.62■□□□□ 0.73
HTRA2O43464 RPS2P4-201ENST00000476944 856 ntBASIC19.62■□□□□ 0.73
HTRA2O43464 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HTRA2O43464 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HTRA2O43464 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTRA2O43464 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HTRA2O43464 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTRA2O43464 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HTRA2O43464 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.62■□□□□ 0.73
HTRA2O43464 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
HTRA2O43464 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
HTRA2O43464 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.61■□□□□ 0.73
HTRA2O43464 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTRA2O43464 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HTRA2O43464 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.61■□□□□ 0.73
HTRA2O43464 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTRA2O43464 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.61■□□□□ 0.73
HTRA2O43464 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.61■□□□□ 0.73
HTRA2O43464 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTRA2O43464 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTRA2O43464 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.61■□□□□ 0.73
HTRA2O43464 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.61■□□□□ 0.73
HTRA2O43464 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HTRA2O43464 AP002982.1-201ENST00000492365 877 ntBASIC19.61■□□□□ 0.73
HTRA2O43464 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.61■□□□□ 0.73
HTRA2O43464 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.61■□□□□ 0.73
HTRA2O43464 AC073195.1-201ENST00000607241 877 ntBASIC19.61■□□□□ 0.73
HTRA2O43464 AP001412.1-201ENST00000608405 714 ntBASIC19.61■□□□□ 0.73
HTRA2O43464 AL049637.2-201ENST00000641778 930 ntBASIC19.61■□□□□ 0.73
HTRA2O43464 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTRA2O43464 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTRA2O43464 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.61■□□□□ 0.73
HTRA2O43464 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTRA2O43464 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.61■□□□□ 0.73
HTRA2O43464 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTRA2O43464 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTRA2O43464 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTRA2O43464 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
HTRA2O43464 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HTRA2O43464 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HTRA2O43464 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.6■□□□□ 0.73
HTRA2O43464 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HTRA2O43464 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.6■□□□□ 0.73
HTRA2O43464 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.6■□□□□ 0.73
HTRA2O43464 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.6■□□□□ 0.73
HTRA2O43464 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.6■□□□□ 0.73
HTRA2O43464 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 KSR1P1-201ENST00000446298 240 ntBASIC19.6■□□□□ 0.73
HTRA2O43464 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.6■□□□□ 0.73
HTRA2O43464 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.6■□□□□ 0.73
HTRA2O43464 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.6■□□□□ 0.73
HTRA2O43464 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.6■□□□□ 0.73
HTRA2O43464 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.6■□□□□ 0.73
HTRA2O43464 AL445675.2-201ENST00000620291 557 ntBASIC19.6■□□□□ 0.73
HTRA2O43464 AC113410.3-201ENST00000623366 203 ntBASIC19.6■□□□□ 0.73
HTRA2O43464 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.6■□□□□ 0.73
HTRA2O43464 HLA-A-209ENST00000638375 975 ntBASIC19.6■□□□□ 0.73
HTRA2O43464 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HTRA2O43464 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HTRA2O43464 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HTRA2O43464 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.59■□□□□ 0.73
HTRA2O43464 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.59■□□□□ 0.73
HTRA2O43464 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HTRA2O43464 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
HTRA2O43464 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms