Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC3O15379 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC3O15379 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.91■□□□□ 0.62
HDAC3O15379 ZNF815P-204ENST00000434898 1737 ntBASIC18.91■□□□□ 0.62
HDAC3O15379 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC3O15379 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
HDAC3O15379 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
HDAC3O15379 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.9■□□□□ 0.62
HDAC3O15379 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.9■□□□□ 0.62
HDAC3O15379 AC079598.2-202ENST00000546624 1451 ntBASIC18.9■□□□□ 0.62
HDAC3O15379 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.9■□□□□ 0.62
HDAC3O15379 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC3O15379 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC3O15379 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC3O15379 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HDAC3O15379 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.9■□□□□ 0.62
HDAC3O15379 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.9■□□□□ 0.62
HDAC3O15379 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC3O15379 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HDAC3O15379 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC3O15379 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HDAC3O15379 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.9■□□□□ 0.62
HDAC3O15379 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.9■□□□□ 0.62
HDAC3O15379 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.9■□□□□ 0.62
HDAC3O15379 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.9■□□□□ 0.62
HDAC3O15379 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC3O15379 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC3O15379 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HDAC3O15379 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC3O15379 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HDAC3O15379 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.9■□□□□ 0.62
HDAC3O15379 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HDAC3O15379 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.9■□□□□ 0.62
HDAC3O15379 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC3O15379 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.9■□□□□ 0.62
HDAC3O15379 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.9■□□□□ 0.62
HDAC3O15379 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
HDAC3O15379 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC3O15379 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.9■□□□□ 0.62
HDAC3O15379 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC3O15379 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HDAC3O15379 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.89■□□□□ 0.62
HDAC3O15379 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
HDAC3O15379 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HDAC3O15379 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC3O15379 AC026471.1-201ENST00000564629 3026 ntBASIC18.89■□□□□ 0.61
HDAC3O15379 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.89■□□□□ 0.61
HDAC3O15379 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC3O15379 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC3O15379 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC3O15379 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HDAC3O15379 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HDAC3O15379 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.89■□□□□ 0.61
HDAC3O15379 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC3O15379 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.89■□□□□ 0.61
HDAC3O15379 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.89■□□□□ 0.61
HDAC3O15379 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC3O15379 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
HDAC3O15379 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC3O15379 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC3O15379 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC3O15379 AC010980.2-201ENST00000587099 1412 ntBASIC18.89■□□□□ 0.61
HDAC3O15379 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC3O15379 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC3O15379 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.89■□□□□ 0.61
HDAC3O15379 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HDAC3O15379 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.89■□□□□ 0.61
HDAC3O15379 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC3O15379 TFP1-202ENST00000475455 1573 ntBASIC18.89■□□□□ 0.61
HDAC3O15379 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC3O15379 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HDAC3O15379 AL031598.1-201ENST00000561511 1773 ntBASIC18.88■□□□□ 0.61
HDAC3O15379 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC3O15379 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.88■□□□□ 0.61
HDAC3O15379 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC3O15379 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC3O15379 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.88■□□□□ 0.61
HDAC3O15379 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.88■□□□□ 0.61
HDAC3O15379 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.88■□□□□ 0.61
HDAC3O15379 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.88■□□□□ 0.61
HDAC3O15379 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC3O15379 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.88■□□□□ 0.61
HDAC3O15379 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.88■□□□□ 0.61
HDAC3O15379 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.88■□□□□ 0.61
HDAC3O15379 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.88■□□□□ 0.61
HDAC3O15379 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC3O15379 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC3O15379 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HDAC3O15379 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.88■□□□□ 0.61
HDAC3O15379 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC3O15379 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC3O15379 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC3O15379 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC3O15379 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC3O15379 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.88■□□□□ 0.61
HDAC3O15379 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC3O15379 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC3O15379 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC3O15379 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HDAC3O15379 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms