Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
TRANK1O15050 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRANK1O15050 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.51■□□□□ 0.87
TRANK1O15050 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.51■□□□□ 0.87
TRANK1O15050 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRANK1O15050 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRANK1O15050 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRANK1O15050 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRANK1O15050 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.5■□□□□ 0.87
TRANK1O15050 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
TRANK1O15050 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.5■□□□□ 0.87
TRANK1O15050 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.5■□□□□ 0.87
TRANK1O15050 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRANK1O15050 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRANK1O15050 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRANK1O15050 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.5■□□□□ 0.87
TRANK1O15050 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.5■□□□□ 0.87
TRANK1O15050 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.5■□□□□ 0.87
TRANK1O15050 SLC25A6P4-201ENST00000586535 553 ntBASIC20.5■□□□□ 0.87
TRANK1O15050 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRANK1O15050 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRANK1O15050 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.5■□□□□ 0.87
TRANK1O15050 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRANK1O15050 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRANK1O15050 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRANK1O15050 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRANK1O15050 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRANK1O15050 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRANK1O15050 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRANK1O15050 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRANK1O15050 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.5■□□□□ 0.87
TRANK1O15050 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.49■□□□□ 0.87
TRANK1O15050 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.49■□□□□ 0.87
TRANK1O15050 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRANK1O15050 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRANK1O15050 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRANK1O15050 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRANK1O15050 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRANK1O15050 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.49■□□□□ 0.87
TRANK1O15050 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.49■□□□□ 0.87
TRANK1O15050 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.49■□□□□ 0.87
TRANK1O15050 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRANK1O15050 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRANK1O15050 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRANK1O15050 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.49■□□□□ 0.87
TRANK1O15050 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRANK1O15050 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRANK1O15050 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRANK1O15050 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRANK1O15050 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
TRANK1O15050 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRANK1O15050 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRANK1O15050 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRANK1O15050 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRANK1O15050 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.48■□□□□ 0.87
TRANK1O15050 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.48■□□□□ 0.87
TRANK1O15050 KRT18P1-202ENST00000452408 1331 ntBASIC20.48■□□□□ 0.87
TRANK1O15050 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.48■□□□□ 0.87
TRANK1O15050 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRANK1O15050 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRANK1O15050 AC121338.2-201ENST00000622535 1744 ntBASIC20.48■□□□□ 0.87
TRANK1O15050 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRANK1O15050 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRANK1O15050 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.48■□□□□ 0.87
TRANK1O15050 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRANK1O15050 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.48■□□□□ 0.87
TRANK1O15050 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRANK1O15050 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.47■□□□□ 0.87
TRANK1O15050 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRANK1O15050 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRANK1O15050 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRANK1O15050 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TRANK1O15050 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRANK1O15050 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.47■□□□□ 0.87
TRANK1O15050 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TRANK1O15050 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRANK1O15050 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRANK1O15050 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRANK1O15050 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.47■□□□□ 0.87
TRANK1O15050 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRANK1O15050 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRANK1O15050 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRANK1O15050 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.47■□□□□ 0.87
TRANK1O15050 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
TRANK1O15050 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.47■□□□□ 0.87
TRANK1O15050 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRANK1O15050 AL049796.1-201ENST00000565336 1766 ntBASIC20.47■□□□□ 0.87
TRANK1O15050 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRANK1O15050 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRANK1O15050 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRANK1O15050 AC079781.3-201ENST00000449110 356 ntBASIC20.47■□□□□ 0.87
TRANK1O15050 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.47■□□□□ 0.87
TRANK1O15050 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.47■□□□□ 0.87
TRANK1O15050 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.47■□□□□ 0.87
TRANK1O15050 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.47■□□□□ 0.87
TRANK1O15050 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.47■□□□□ 0.87
TRANK1O15050 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRANK1O15050 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRANK1O15050 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.46■□□□□ 0.87
TRANK1O15050 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms