Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM38O00635 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM38O00635 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM38O00635 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM38O00635 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM38O00635 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM38O00635 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRIM38O00635 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM38O00635 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 FAM197Y1-201ENST00000421178 764 ntBASIC19.54■□□□□ 0.72
TRIM38O00635 AL355355.2-201ENST00000442321 338 ntBASIC19.54■□□□□ 0.72
TRIM38O00635 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRIM38O00635 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM38O00635 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.54■□□□□ 0.72
TRIM38O00635 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM38O00635 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM38O00635 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM38O00635 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM38O00635 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRIM38O00635 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
TRIM38O00635 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM38O00635 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM38O00635 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM38O00635 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM38O00635 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM38O00635 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM38O00635 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM38O00635 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM38O00635 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TRIM38O00635 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM38O00635 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM38O00635 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM38O00635 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM38O00635 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM38O00635 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
TRIM38O00635 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM38O00635 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM38O00635 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TRIM38O00635 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM38O00635 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM38O00635 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM38O00635 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM38O00635 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM38O00635 AL353807.1-201ENST00000427475 662 ntBASIC19.52■□□□□ 0.72
TRIM38O00635 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.52■□□□□ 0.72
TRIM38O00635 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM38O00635 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM38O00635 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM38O00635 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
TRIM38O00635 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.52■□□□□ 0.72
TRIM38O00635 AL121906.2-201ENST00000621597 723 ntBASIC19.52■□□□□ 0.72
TRIM38O00635 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM38O00635 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
TRIM38O00635 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM38O00635 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM38O00635 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM38O00635 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM38O00635 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM38O00635 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM38O00635 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM38O00635 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM38O00635 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM38O00635 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM38O00635 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM38O00635 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
TRIM38O00635 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM38O00635 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRIM38O00635 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM38O00635 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM38O00635 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM38O00635 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM38O00635 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM38O00635 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM38O00635 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM38O00635 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM38O00635 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM38O00635 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM38O00635 AC125437.2-201ENST00000625180 2167 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms