Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.48■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 MFAP1P1-201ENST00000442257 1255 ntBASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AC008040.2-201ENST00000461049 708 ntBASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 EGLN1P1-201ENST00000531623 762 ntBASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AC096733.2-201ENST00000609937 1394 ntBASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 RCN1P1-201ENST00000400413 996 ntBASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AC128688.1-201ENST00000487626 519 ntBASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 AL157384.1-201ENST00000445995 2473 ntBASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 TSPY14P-201ENST00000303979 915 ntBASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 MIR1224-201ENST00000408193 85 ntBASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AC113347.1-201ENST00000413321 391 ntBASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 LINC01465-201ENST00000408887 1940 ntBASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.44■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms