Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF223E7ERA6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF223E7ERA6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF223E7ERA6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF223E7ERA6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RNF223E7ERA6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF223E7ERA6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF223E7ERA6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF223E7ERA6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF223E7ERA6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF223E7ERA6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF223E7ERA6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF223E7ERA6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF223E7ERA6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF223E7ERA6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF223E7ERA6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF223E7ERA6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF223E7ERA6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF223E7ERA6 DUSP5P1-201ENST00000441325 1139 ntBASIC16.14■□□□□ 0.17
RNF223E7ERA6 HCG4P8-203ENST00000443049 980 ntBASIC16.14■□□□□ 0.17
RNF223E7ERA6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF223E7ERA6 AL441883.1-201ENST00000566170 1045 ntBASIC16.14■□□□□ 0.17
RNF223E7ERA6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
RNF223E7ERA6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF223E7ERA6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF223E7ERA6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF223E7ERA6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF223E7ERA6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF223E7ERA6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF223E7ERA6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF223E7ERA6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF223E7ERA6 KRT8P8-201ENST00000434750 1448 ntBASIC16.13■□□□□ 0.17
RNF223E7ERA6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF223E7ERA6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF223E7ERA6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
RNF223E7ERA6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF223E7ERA6 AL450487.1-201ENST00000426799 995 ntBASIC16.13■□□□□ 0.17
RNF223E7ERA6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF223E7ERA6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF223E7ERA6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RNF223E7ERA6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF223E7ERA6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF223E7ERA6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF223E7ERA6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF223E7ERA6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF223E7ERA6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF223E7ERA6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF223E7ERA6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF223E7ERA6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF223E7ERA6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF223E7ERA6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.13■□□□□ 0.17
RNF223E7ERA6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RNF223E7ERA6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RNF223E7ERA6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF223E7ERA6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF223E7ERA6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF223E7ERA6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF223E7ERA6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF223E7ERA6 SMG8-203ENST00000578922 2178 ntBASIC16.12■□□□□ 0.17
RNF223E7ERA6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF223E7ERA6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF223E7ERA6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF223E7ERA6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF223E7ERA6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF223E7ERA6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF223E7ERA6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF223E7ERA6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF223E7ERA6 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF223E7ERA6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF223E7ERA6 AL160286.2-201ENST00000567150 934 ntBASIC16.12■□□□□ 0.17
RNF223E7ERA6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF223E7ERA6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF223E7ERA6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF223E7ERA6 AC022726.2-201ENST00000634673 547 ntBASIC16.12■□□□□ 0.17
RNF223E7ERA6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF223E7ERA6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RNF223E7ERA6 AC005332.1-201ENST00000577698 1310 ntBASIC16.12■□□□□ 0.17
RNF223E7ERA6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF223E7ERA6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF223E7ERA6 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF223E7ERA6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF223E7ERA6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF223E7ERA6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF223E7ERA6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF223E7ERA6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF223E7ERA6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RNF223E7ERA6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RNF223E7ERA6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF223E7ERA6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF223E7ERA6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RNF223E7ERA6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RNF223E7ERA6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF223E7ERA6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RNF223E7ERA6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF223E7ERA6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF223E7ERA6 AC026396.1-201ENST00000419388 421 ntBASIC16.11■□□□□ 0.17
RNF223E7ERA6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF223E7ERA6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF223E7ERA6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF223E7ERA6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms