Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 AC141586.3-201ENST00000562166 1838 ntBASIC13.81□□□□□ -0.2
LINC01549A6NIU2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 AL356652.1-201ENST00000615962 565 ntBASIC13.81□□□□□ -0.2
LINC01549A6NIU2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 AC106820.2-201ENST00000563775 3264 ntBASIC13.81□□□□□ -0.2
LINC01549A6NIU2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 AP000997.3-201ENST00000623333 2250 ntBASIC13.8□□□□□ -0.2
LINC01549A6NIU2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 AC006333.2-201ENST00000607957 2099 ntBASIC13.8□□□□□ -0.2
LINC01549A6NIU2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 MIR572-201ENST00000384983 95 ntBASIC13.8□□□□□ -0.2
LINC01549A6NIU2 AC010141.2-201ENST00000452426 721 ntBASIC13.8□□□□□ -0.2
LINC01549A6NIU2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 KRT18P20-201ENST00000548986 1279 ntBASIC13.8□□□□□ -0.2
LINC01549A6NIU2 SRR-208ENST00000576848 588 ntTSL 4 BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 AL031963.3-201ENST00000606441 850 ntBASIC13.8□□□□□ -0.2
LINC01549A6NIU2 AL355001.2-201ENST00000620617 1191 ntBASIC13.8□□□□□ -0.2
LINC01549A6NIU2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 AL031598.1-201ENST00000561511 1773 ntBASIC13.8□□□□□ -0.2
LINC01549A6NIU2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 KRT8P20-201ENST00000423953 1409 ntBASIC13.8□□□□□ -0.2
LINC01549A6NIU2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 BICD1-207ENST00000551848 1962 ntBASIC13.8□□□□□ -0.2
LINC01549A6NIU2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01549A6NIU2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 AL161938.1-201ENST00000569833 2180 ntBASIC13.79□□□□□ -0.2
LINC01549A6NIU2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.79□□□□□ -0.2
LINC01549A6NIU2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 AC091799.1-201ENST00000422823 811 ntBASIC13.79□□□□□ -0.2
LINC01549A6NIU2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 AC079140.4-201ENST00000507448 529 ntBASIC13.79□□□□□ -0.2
LINC01549A6NIU2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 NOC2LP2-201ENST00000407594 1944 ntBASIC13.79□□□□□ -0.2
LINC01549A6NIU2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01549A6NIU2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms