Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 AC110285.5-201ENST00000611501 352 ntBASIC19.71■□□□□ 0.75
CAPN8A6NHC0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN8A6NHC0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 FAM197Y4-202ENST00000622692 608 ntBASIC19.7■□□□□ 0.74
CAPN8A6NHC0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.7■□□□□ 0.74
CAPN8A6NHC0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.7■□□□□ 0.74
CAPN8A6NHC0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.69■□□□□ 0.74
CAPN8A6NHC0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 KRT18P16-201ENST00000510337 1294 ntBASIC19.68■□□□□ 0.74
CAPN8A6NHC0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN8A6NHC0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CAPN8A6NHC0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN8A6NHC0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN8A6NHC0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.67■□□□□ 0.74
CAPN8A6NHC0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN8A6NHC0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN8A6NHC0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CAPN8A6NHC0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN8A6NHC0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN8A6NHC0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN8A6NHC0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN8A6NHC0 KRT18P21-201ENST00000515767 1272 ntBASIC19.67■□□□□ 0.74
CAPN8A6NHC0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.67■□□□□ 0.74
CAPN8A6NHC0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.67■□□□□ 0.74
CAPN8A6NHC0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms