Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 UNC93B5-201ENST00000530315 699 ntBASIC19.65■□□□□ 0.74
CCDC78A2IDD5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 AL121906.2-201ENST00000621597 723 ntBASIC19.65■□□□□ 0.74
CCDC78A2IDD5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC78A2IDD5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CCDC78A2IDD5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
CCDC78A2IDD5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.64■□□□□ 0.74
CCDC78A2IDD5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC78A2IDD5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC78A2IDD5 AC098818.2-201ENST00000564925 2320 ntBASIC19.64■□□□□ 0.74
CCDC78A2IDD5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC78A2IDD5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC78A2IDD5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.63■□□□□ 0.73
CCDC78A2IDD5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 AC008403.3-201ENST00000598924 454 ntBASIC19.63■□□□□ 0.73
CCDC78A2IDD5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC78A2IDD5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC78A2IDD5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC78A2IDD5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC78A2IDD5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC78A2IDD5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC78A2IDD5 AP006587.1-201ENST00000534129 1502 ntBASIC19.62■□□□□ 0.73
CCDC78A2IDD5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC78A2IDD5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC78A2IDD5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms