Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGKV3D-20A0A0C4DH25 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGKV3D-20A0A0C4DH25 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
IGKV3D-20A0A0C4DH25 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGKV3D-20A0A0C4DH25 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
IGKV3D-20A0A0C4DH25 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
IGKV3D-20A0A0C4DH25 CROCCP3-202ENST00000420820 1947 ntBASIC14.45□□□□□ -0.1
IGKV3D-20A0A0C4DH25 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGKV3D-20A0A0C4DH25 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 ZNRF2P3-201ENST00000424200 374 ntBASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-20A0A0C4DH25 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 AC068338.2-201ENST00000563278 1430 ntBASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 KRT18P11-201ENST00000435214 1283 ntBASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
IGKV3D-20A0A0C4DH25 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 AL161938.1-201ENST00000569833 2180 ntBASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 AC023632.3-201ENST00000521633 145 ntBASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.42□□□□□ -0.1
IGKV3D-20A0A0C4DH25 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms