Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 RAP2CP1-201ENST00000605103 478 ntBASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 CDCA4P2-201ENST00000441182 718 ntBASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 AC005829.2-201ENST00000571422 1056 ntBASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV30A0A087WSZ9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 MIR663A-201ENST00000385250 93 ntBASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 AL121832.2-201ENST00000610979 668 ntBASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV30A0A087WSZ9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms