Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 AC068254.2-201ENST00000623938 3577 ntBASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 CYB5AP4-201ENST00000396692 399 ntBASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 P2RY10P2-201ENST00000416730 913 ntBASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 MTND6P18-201ENST00000439477 513 ntBASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 RPL35P6-201ENST00000490024 372 ntBASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 RN7SL691P-201ENST00000494487 301 ntBASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 HNRNPKP5-201ENST00000515300 253 ntBASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 AL139254.3-201ENST00000641097 674 ntBASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 AC097504.1-201ENST00000515103 2415 ntBASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 MARK2P15-201ENST00000432204 2186 ntBASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.76□□□□□ -1.81
TRAV27A0A087WT01 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 MAPK10-253ENST00000641010 4072 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 IGKV7-3-201ENST00000357453 298 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 RNA5SP447-201ENST00000363749 119 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 PGBD4P8-201ENST00000412993 562 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 JKAMPP1-201ENST00000413804 919 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 VDAC1P6-201ENST00000430062 855 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 RPS29P17-201ENST00000430795 166 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 RPL23AP46-201ENST00000438548 490 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 FHP1-201ENST00000442741 703 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 AC109327.1-201ENST00000471666 403 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 AC013356.1-201ENST00000489027 564 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 AC139783.2-201ENST00000504847 1145 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 AC021733.2-201ENST00000518830 497 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 AC137768.1-201ENST00000549998 553 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 TVP23BP1-201ENST00000557500 617 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 AC007599.1-201ENST00000568688 1174 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 AC022655.2-201ENST00000577280 318 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 FAM27D1-201ENST00000612308 341 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 AC093909.5-201ENST00000621839 1799 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 XKRY2-202ENST00000623874 1581 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 XKRY-202ENST00000624960 1581 ntBASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRAV27A0A087WT01 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.74□□□□□ -1.81
TRAV27A0A087WT01 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.74□□□□□ -1.81
TRAV27A0A087WT01 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRAV27A0A087WT01 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRAV27A0A087WT01 SNORA3C-201ENST00000408792 125 ntBASIC3.74□□□□□ -1.81
TRAV27A0A087WT01 PTP4A1P1-201ENST00000420539 515 ntBASIC3.74□□□□□ -1.81
TRAV27A0A087WT01 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRAV27A0A087WT01 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.74□□□□□ -1.81
TRAV27A0A087WT01 HMGB3P9-201ENST00000441799 583 ntBASIC3.74□□□□□ -1.81
TRAV27A0A087WT01 TXNP2-201ENST00000443918 295 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms