Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 FAM32BP-201ENST00000344033 333 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 RN7SKP44-201ENST00000363602 316 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 Y_RNA.197-201ENST00000364004 102 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 RNU6-282P-201ENST00000365357 103 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 SUGT1P1-201ENST00000379514 476 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 MIR548I3-201ENST00000408378 149 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 MIR548I1-201ENST00000408810 149 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 RPLP1P10-201ENST00000413972 339 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 MTATP6P18-201ENST00000417994 673 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 PMCHL1-202ENST00000423102 261 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 LINC00328-2P-201ENST00000436585 219 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 MED28P7-201ENST00000456611 530 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 RNU7-152P-201ENST00000458982 64 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 RN7SL168P-201ENST00000463821 279 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC044810.1-201ENST00000480271 711 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC090638.1-201ENST00000498296 909 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC107952.1-201ENST00000524200 376 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC013828.2-201ENST00000532487 235 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 SNRPGP18-201ENST00000553000 214 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 CYCSP2-201ENST00000558168 301 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC138915.2-201ENST00000569776 97 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 RN7SL426P-201ENST00000579106 295 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 RN7SL32P-201ENST00000580514 281 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC010463.3-201ENST00000594077 500 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC021646.1-201ENST00000605469 484 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AL031777.2-201ENST00000611953 196 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC084781.2-201ENST00000615568 161 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC022418.1-201ENST00000624118 445 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC025574.1-201ENST00000554784 1653 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC092447.10-201ENST00000620607 1652 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 GAPDHP24-201ENST00000328713 983 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 MIR191-201ENST00000384873 92 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 RPL32P23-201ENST00000397237 405 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 RNU2-8P-201ENST00000410727 190 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AL450992.3-201ENST00000413192 568 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 RPL12P11-201ENST00000439970 501 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 DEFA11P-201ENST00000446470 261 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC012512.1-201ENST00000446594 718 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 TCEA1P1-201ENST00000449716 880 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC138517.1-201ENST00000515724 568 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 RNU6-559P-201ENST00000516151 98 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 SNORA40.12-201ENST00000516329 111 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 RNU6-406P-201ENST00000516470 107 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 RNA5SP135-201ENST00000517019 125 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms