Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL11A1P12107 USP9YP4-201ENST00000424401 1745 ntBASIC4.74□□□□□ -1.65
COL11A1P12107 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL11A1P12107 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL11A1P12107 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.74□□□□□ -1.65
COL11A1P12107 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
COL11A1P12107 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL11A1P12107 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.74□□□□□ -1.65
COL11A1P12107 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
COL11A1P12107 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
COL11A1P12107 RNU6-761P-201ENST00000384148 107 ntBASIC4.74□□□□□ -1.65
COL11A1P12107 AL607077.1-201ENST00000401718 499 ntBASIC4.74□□□□□ -1.65
COL11A1P12107 RN7SKP202-201ENST00000410439 330 ntBASIC4.74□□□□□ -1.65
COL11A1P12107 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.74□□□□□ -1.65
COL11A1P12107 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.74□□□□□ -1.65
COL11A1P12107 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.74□□□□□ -1.65
COL11A1P12107 PPIAP13-201ENST00000434706 478 ntBASIC4.74□□□□□ -1.65
COL11A1P12107 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.74□□□□□ -1.65
COL11A1P12107 USP9YP2-201ENST00000504503 1000 ntBASIC4.74□□□□□ -1.65
COL11A1P12107 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.74□□□□□ -1.65
COL11A1P12107 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL11A1P12107 USP9YP1-201ENST00000513521 1002 ntBASIC4.74□□□□□ -1.65
COL11A1P12107 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.74□□□□□ -1.65
COL11A1P12107 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.74□□□□□ -1.65
COL11A1P12107 MIR5684-201ENST00000585074 65 ntBASIC4.74□□□□□ -1.65
COL11A1P12107 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.74□□□□□ -1.65
COL11A1P12107 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.74□□□□□ -1.65
COL11A1P12107 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL11A1P12107 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
COL11A1P12107 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
COL11A1P12107 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.74□□□□□ -1.65
COL11A1P12107 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL11A1P12107 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
COL11A1P12107 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL11A1P12107 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.73□□□□□ -1.65
COL11A1P12107 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL11A1P12107 AP001642.1-201ENST00000624727 2117 ntBASIC4.73□□□□□ -1.65
COL11A1P12107 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL11A1P12107 CASC19-261ENST00000641853 1638 ntBASIC4.73□□□□□ -1.65
COL11A1P12107 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.73□□□□□ -1.65
COL11A1P12107 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
COL11A1P12107 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.73□□□□□ -1.65
COL11A1P12107 GOT2P5-201ENST00000433995 546 ntBASIC4.73□□□□□ -1.65
COL11A1P12107 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.73□□□□□ -1.65
COL11A1P12107 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.73□□□□□ -1.65
COL11A1P12107 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL11A1P12107 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.73□□□□□ -1.65
COL11A1P12107 HPRT1P2-201ENST00000505250 544 ntBASIC4.73□□□□□ -1.65
COL11A1P12107 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.73□□□□□ -1.65
COL11A1P12107 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL11A1P12107 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.73□□□□□ -1.65
COL11A1P12107 AC090312.1-201ENST00000580637 348 ntBASIC4.73□□□□□ -1.65
COL11A1P12107 SLC25A36P1-201ENST00000590111 465 ntBASIC4.73□□□□□ -1.65
COL11A1P12107 AC114878.2-201ENST00000604863 1251 ntBASIC4.73□□□□□ -1.65
COL11A1P12107 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL11A1P12107 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL11A1P12107 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL11A1P12107 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.73□□□□□ -1.65
COL11A1P12107 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
COL11A1P12107 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
COL11A1P12107 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL11A1P12107 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
COL11A1P12107 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
COL11A1P12107 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
COL11A1P12107 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL11A1P12107 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A1P12107 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.72□□□□□ -1.65
COL11A1P12107 RNU4-6P-201ENST00000410804 122 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 OR8F1P-201ENST00000425243 930 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 RPS26P2-201ENST00000440331 348 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.72□□□□□ -1.65
COL11A1P12107 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.72□□□□□ -1.65
COL11A1P12107 RPL7P15-201ENST00000461190 712 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 DEFB109F-201ENST00000491870 277 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.72□□□□□ -1.65
COL11A1P12107 PHBP17-201ENST00000528576 541 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 AL352979.3-201ENST00000553515 247 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 AC022655.2-201ENST00000577280 318 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.72□□□□□ -1.65
COL11A1P12107 AL138721.1-201ENST00000616756 179 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 AC090220.1-201ENST00000593078 1699 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A1P12107 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.72□□□□□ -1.65
COL11A1P12107 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.72□□□□□ -1.65
COL11A1P12107 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A1P12107 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A1P12107 AC092162.3-201ENST00000624511 1624 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A1P12107 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
COL11A1P12107 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A1P12107 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A1P12107 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A1P12107 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A1P12107 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A1P12107 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
COL11A1P12107 U8.11-201ENST00000384699 133 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 U8.12-201ENST00000384701 133 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.72□□□□□ -1.65
COL11A1P12107 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.72□□□□□ -1.65
COL11A1P12107 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms