Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 GNG5P1-201ENST00000255500 204 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 RNU6-532P-201ENST00000384318 107 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 MIR152-201ENST00000385212 87 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AL590143.1-201ENST00000405071 138 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC062016.2-201ENST00000420950 676 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AL034379.1-201ENST00000423216 253 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AL589872.1-201ENST00000426602 288 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC096644.2-201ENST00000429278 159 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 RPL23AP19-201ENST00000436229 369 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AL031736.1-201ENST00000449688 618 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 RN7SL870P-201ENST00000460111 296 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 RN7SL413P-201ENST00000482700 297 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 RPL32P9-201ENST00000487963 407 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 MTCO1P29-201ENST00000496868 288 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 GAPDHP56-201ENST00000506031 988 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC022868.1-201ENST00000517767 391 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 MIR4489-201ENST00000578869 62 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 MIR548Y-201ENST00000582739 110 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC115621.1-201ENST00000604653 858 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AL022345.1-201ENST00000607292 135 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 MTND5P30-201ENST00000452896 1731 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 AC046144.1-201ENST00000478559 1853 ntBASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTNAP3Q9BZ76 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
CNTNAP3Q9BZ76 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
CNTNAP3Q9BZ76 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.33
CNTNAP3Q9BZ76 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CNTNAP3Q9BZ76 ZNF807-201ENST00000328088 1707 ntBASIC6.71□□□□□ -1.34
CNTNAP3Q9BZ76 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CNTNAP3Q9BZ76 RN7SKP162-201ENST00000363605 345 ntBASIC6.71□□□□□ -1.34
CNTNAP3Q9BZ76 RNA5SP242-201ENST00000364171 118 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms