Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 AC024940.4-201ENST00000605507 246 ntBASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 AC100847.1-201ENST00000611316 481 ntBASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 AC007546.2-201ENST00000623996 360 ntBASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 OR2L1P-202ENST00000641567 1023 ntBASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 AL031985.3-201ENST00000565390 2449 ntBASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TTC9CQ8N5M4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 AC105074.1-201ENST00000623380 3095 ntBASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 OR56B2P-202ENST00000641377 2453 ntBASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 MIR659-201ENST00000384963 97 ntBASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 MIR3065-201ENST00000390137 79 ntBASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 AC009302.1-201ENST00000417147 390 ntBASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 CYP4F29P-201ENST00000420685 446 ntBASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 RPS27AP17-201ENST00000463344 455 ntBASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 AP006289.1-201ENST00000538089 277 ntBASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 RPL23AP97-201ENST00000568955 471 ntBASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 AL121834.1-201ENST00000572284 509 ntBASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 AC100827.5-201ENST00000615883 426 ntBASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 AL138721.1-201ENST00000616756 179 ntBASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 MIR6730-201ENST00000622213 67 ntBASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 AL592148.3-201ENST00000608771 2646 ntBASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TTC9CQ8N5M4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 RHOT1P2-201ENST00000366423 333 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 AL050305.1-201ENST00000399993 1230 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 RPS3AP23-201ENST00000401762 784 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 NCSTNP1-201ENST00000406229 144 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 RPS16P5-201ENST00000406501 404 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 AL590139.1-201ENST00000416267 400 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 RWDD4P2-201ENST00000426392 563 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 NANOGP6-201ENST00000429190 847 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 AC114495.1-201ENST00000441274 436 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 SEPT14P1-201ENST00000458703 648 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 AC053481.1-201ENST00000467217 306 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 RWDD4P1-201ENST00000488019 565 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 RN7SL812P-201ENST00000493791 279 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 DEFB109D-201ENST00000529497 240 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 AC100770.1-201ENST00000532310 322 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 AC084783.1-201ENST00000565846 910 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 Mico1.1-201ENST00000611698 204 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 MIR6891-201ENST00000618788 93 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 RLIMP2-201ENST00000427891 1563 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TTC9CQ8N5M4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.48□□□□□ -1.85
TTC9CQ8N5M4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.48□□□□□ -1.85
TTC9CQ8N5M4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.48□□□□□ -1.85
TTC9CQ8N5M4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TTC9CQ8N5M4 Z73965.1-201ENST00000623412 2297 ntBASIC3.48□□□□□ -1.85
TTC9CQ8N5M4 RNA5SP52-201ENST00000362448 134 ntBASIC3.48□□□□□ -1.85
TTC9CQ8N5M4 RNVU1-6-201ENST00000364688 164 ntBASIC3.48□□□□□ -1.85
TTC9CQ8N5M4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms