Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 AC017099.1-201ENST00000448261 1028 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 RHEBP2-201ENST00000450289 600 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 EIF4A1P11-201ENST00000451239 222 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 AC234781.3-201ENST00000452540 973 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 FGF7P3-201ENST00000454645 303 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 CCDC75P1-201ENST00000469247 791 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 RPL23AP73-201ENST00000492507 471 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 TCP11X3P-202ENST00000514289 1254 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 SNORA76.2-201ENST00000517095 137 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 AL049839.1-201ENST00000556151 657 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 AC005520.3-201ENST00000602874 370 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 AC011374.2-201ENST00000607135 526 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 AC010424.2-201ENST00000607594 443 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 AP002799.1-201ENST00000623552 423 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 AC020923.1-201ENST00000624021 917 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 CR381572.2-201ENST00000624852 397 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 BMS1P21-201ENST00000634565 365 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 CASC19-222ENST00000641321 1173 ntBASIC3.17□□□□□ -1.9
SYCNQ0VAF6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SYCNQ0VAF6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 AC090971.4-201ENST00000560291 1800 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 AC008549.2-201ENST00000333482 706 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 IGKV7-3-201ENST00000357453 298 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 RNA5SP305-201ENST00000362665 119 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 RNA5SP507-201ENST00000363603 121 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 RNU4-4P-201ENST00000364588 130 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 MIR765-201ENST00000390226 114 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 AC005522.1-201ENST00000395416 346 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 RNA5SP345-201ENST00000410646 108 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 RN7SKP273-201ENST00000411392 314 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 DPPA2P3-201ENST00000411853 655 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 AC114755.2-201ENST00000413520 361 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 GTF2IP5-201ENST00000414608 731 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 GTF3AP1-201ENST00000416942 1004 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 MTCO3P4-201ENST00000419236 787 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 MED6P1-201ENST00000439659 713 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 YWHAZP2-201ENST00000440317 728 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 RPS26P2-201ENST00000440331 348 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 EEF1B2P5-201ENST00000444820 548 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 snoU13.20-201ENST00000459180 104 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 RPL23AP37-201ENST00000479658 549 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 RPSAP50-201ENST00000481955 852 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 PPM1AP1-201ENST00000502740 1135 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 AC025768.1-201ENST00000510057 267 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 NDUFB4P12-201ENST00000513465 390 ntBASIC3.16□□□□□ -1.9
SYCNQ0VAF6 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.16□□□□□ -1.9
SYCNQ0VAF6 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms