Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.17□□□□□ -1.58
RFC1P35251 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFC1P35251 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFC1P35251 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.17□□□□□ -1.58
RFC1P35251 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.17□□□□□ -1.58
RFC1P35251 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.17□□□□□ -1.58
RFC1P35251 AP000919.1-202ENST00000581139 1264 ntBASIC5.17□□□□□ -1.58
RFC1P35251 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.17□□□□□ -1.58
RFC1P35251 AP001160.4-201ENST00000596971 382 ntBASIC5.17□□□□□ -1.58
RFC1P35251 AC006946.3-201ENST00000609791 756 ntBASIC5.17□□□□□ -1.58
RFC1P35251 RNU6-1192P-201ENST00000612197 107 ntBASIC5.17□□□□□ -1.58
RFC1P35251 RNU6-489P-201ENST00000618289 107 ntBASIC5.17□□□□□ -1.58
RFC1P35251 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFC1P35251 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFC1P35251 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.17□□□□□ -1.58
RFC1P35251 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.17□□□□□ -1.58
RFC1P35251 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RFC1P35251 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.17□□□□□ -1.58
RFC1P35251 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFC1P35251 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFC1P35251 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFC1P35251 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFC1P35251 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.16□□□□□ -1.58
RFC1P35251 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFC1P35251 AC009643.2-201ENST00000603543 1448 ntBASIC5.16□□□□□ -1.58
RFC1P35251 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFC1P35251 AC087190.4-201ENST00000574616 8334 ntBASIC5.16□□□□□ -1.58
RFC1P35251 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RFC1P35251 RNU5B-4P-201ENST00000363508 111 ntBASIC5.16□□□□□ -1.58
RFC1P35251 RNU4-4P-201ENST00000364588 130 ntBASIC5.16□□□□□ -1.58
RFC1P35251 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RFC1P35251 RNU6-298P-201ENST00000390888 96 ntBASIC5.16□□□□□ -1.58
RFC1P35251 Z97832.1-201ENST00000402490 328 ntBASIC5.16□□□□□ -1.58
RFC1P35251 ATF1P1-201ENST00000406040 927 ntBASIC5.16□□□□□ -1.58
RFC1P35251 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC1P35251 RN7SKP213-201ENST00000410746 298 ntBASIC5.16□□□□□ -1.58
RFC1P35251 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.16□□□□□ -1.58
RFC1P35251 AC010385.1-201ENST00000412374 256 ntBASIC5.16□□□□□ -1.58
RFC1P35251 AC093162.1-201ENST00000419682 124 ntBASIC5.16□□□□□ -1.58
RFC1P35251 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.16□□□□□ -1.58
RFC1P35251 PNRC2P1-201ENST00000423940 420 ntBASIC5.16□□□□□ -1.58
RFC1P35251 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.16□□□□□ -1.58
RFC1P35251 RPL34P6-201ENST00000432390 345 ntBASIC5.16□□□□□ -1.58
RFC1P35251 MTCYBP15-201ENST00000433123 1127 ntBASIC5.16□□□□□ -1.58
RFC1P35251 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.16□□□□□ -1.58
RFC1P35251 MED6P1-201ENST00000439659 713 ntBASIC5.16□□□□□ -1.58
RFC1P35251 TPTE2P3-201ENST00000441562 1189 ntBASIC5.16□□□□□ -1.58
RFC1P35251 AC000111.2-201ENST00000448200 210 ntBASIC5.16□□□□□ -1.58
RFC1P35251 MYO5BP2-201ENST00000449815 1277 ntBASIC5.16□□□□□ -1.58
RFC1P35251 RNA5SP103-201ENST00000459503 118 ntBASIC5.16□□□□□ -1.58
RFC1P35251 RPS3AP6-201ENST00000484430 795 ntBASIC5.16□□□□□ -1.58
RFC1P35251 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.16□□□□□ -1.58
RFC1P35251 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
RFC1P35251 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.16□□□□□ -1.58
RFC1P35251 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.16□□□□□ -1.58
RFC1P35251 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFC1P35251 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.16□□□□□ -1.58
RFC1P35251 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.16□□□□□ -1.58
RFC1P35251 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.16□□□□□ -1.58
RFC1P35251 AGGF1P5-201ENST00000567900 919 ntBASIC5.16□□□□□ -1.58
RFC1P35251 TVP23CP2-201ENST00000571473 623 ntBASIC5.16□□□□□ -1.58
RFC1P35251 MTATP6P24-201ENST00000576835 677 ntBASIC5.16□□□□□ -1.58
RFC1P35251 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.16□□□□□ -1.58
RFC1P35251 SUMO2P14-201ENST00000604488 293 ntBASIC5.16□□□□□ -1.58
RFC1P35251 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.16□□□□□ -1.58
RFC1P35251 SDR42E1P1-201ENST00000611327 477 ntBASIC5.16□□□□□ -1.58
RFC1P35251 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.16□□□□□ -1.58
RFC1P35251 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.16□□□□□ -1.58
RFC1P35251 AC016769.4-201ENST00000616893 535 ntBASIC5.16□□□□□ -1.58
RFC1P35251 AP002799.1-201ENST00000623552 423 ntBASIC5.16□□□□□ -1.58
RFC1P35251 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.16□□□□□ -1.58
RFC1P35251 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.16□□□□□ -1.58
RFC1P35251 AC006927.2-201ENST00000639256 389 ntBASIC5.16□□□□□ -1.58
RFC1P35251 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RFC1P35251 HSPA8P18-201ENST00000439846 1928 ntBASIC5.16□□□□□ -1.58
RFC1P35251 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RFC1P35251 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RFC1P35251 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.16□□□□□ -1.58
RFC1P35251 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RFC1P35251 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFC1P35251 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFC1P35251 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
RFC1P35251 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RFC1P35251 RNA5SP305-201ENST00000362665 119 ntBASIC5.15□□□□□ -1.59
RFC1P35251 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RFC1P35251 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
RFC1P35251 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RFC1P35251 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RFC1P35251 HMGB1P10-201ENST00000395823 563 ntBASIC5.15□□□□□ -1.59
RFC1P35251 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.15□□□□□ -1.59
RFC1P35251 TBCAP2-201ENST00000416175 326 ntBASIC5.15□□□□□ -1.59
RFC1P35251 PTP4A1P7-201ENST00000423476 514 ntBASIC5.15□□□□□ -1.59
RFC1P35251 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.15□□□□□ -1.59
RFC1P35251 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.15□□□□□ -1.59
RFC1P35251 RPL23AP56-201ENST00000460778 453 ntBASIC5.15□□□□□ -1.59
RFC1P35251 GYG1P1-201ENST00000460864 698 ntBASIC5.15□□□□□ -1.59
RFC1P35251 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.15□□□□□ -1.59
RFC1P35251 AC008427.1-201ENST00000503102 655 ntBASIC5.15□□□□□ -1.59
RFC1P35251 SNORA19.3-201ENST00000516165 130 ntBASIC5.15□□□□□ -1.59
RFC1P35251 AC010376.1-201ENST00000522101 334 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms