Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC136443.1-201ENST00000526173 355 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AP001781.1-201ENST00000530977 207 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RPL38-207ENST00000534490 429 ntAPPRIS ALT1 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC023511.1-201ENST00000549055 571 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ENSAP2-201ENST00000554405 352 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RNASE12-201ENST00000556526 631 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL358334.1-201ENST00000557152 174 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC096996.2-201ENST00000563906 426 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC010931.1-201ENST00000565063 386 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC009093.3-201ENST00000567688 351 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC091062.1-201ENST00000572491 457 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC090282.2-201ENST00000573526 931 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC130343.1-201ENST00000576540 459 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 C17orf62-215ENST00000578913 563 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC138207.3-201ENST00000585289 166 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 UBA52-205ENST00000595683 779 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC016885.3-201ENST00000598428 258 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AURKC-207ENST00000599062 921 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL020997.2-201ENST00000602607 184 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TRMT112P7-201ENST00000603133 367 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 UNGP3-201ENST00000603734 675 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC069114.2-201ENST00000604699 304 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC011891.2-201ENST00000604949 397 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ARF4P1-201ENST00000605447 541 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AP004247.4-201ENST00000608484 942 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 MIR6511A2-201ENST00000611011 67 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SPATA3-210ENST00000612823 786 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 MIR6511A3-201ENST00000615389 67 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 MIR6511A4-201ENST00000615860 67 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 MIR6776-201ENST00000616678 59 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 MIR6511A1-201ENST00000617664 67 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SNORD3D-201ENST00000619178 218 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC012629.4-201ENST00000623327 259 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 5_8S_rRNA.5-201ENST00000638132 152 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 HS6ST2-206ENST00000640529 831 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC097493.5-201ENST00000641103 1010 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC091304.10-201ENST00000641554 121 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TULP4-201ENST00000367094 5170 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF566-204ENST00000434377 5197 ntAPPRIS P3 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC091304.1-201ENST00000564897 3034 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ATP2C1-204ENST00000428331 4795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 DAPK2-201ENST00000261891 2603 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC27A6-202ENST00000395266 2616 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL512638.2-201ENST00000425449 2610 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 NSMAF-201ENST00000038176 3569 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 PABPC4L-201ENST00000421491 4944 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 DAB2-217ENST00000545653 4537 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TYW1-207ENST00000615572 3156 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 UTP4-202ENST00000352319 1841 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 CASP7-205ENST00000369331 2380 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 NPAP1P4-201ENST00000443325 3310 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 NAT10-210ENST00000615292 3329 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TARID-209ENST00000630119 4294 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 NUDT21-201ENST00000300291 4436 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC008691.1-205ENST00000635333 1963 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 NR4A2-201ENST00000339562 3472 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SRGAP2-AS1-202ENST00000437515 2504 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 NOS2-201ENST00000313735 4176 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 CELF1-203ENST00000361904 1580 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL355877.1-201ENST00000428812 2108 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ACSL6-204ENST00000379244 2658 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 DDX19B-201ENST00000288071 3386 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ENTPD3-201ENST00000301825 2819 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TUBB-207ENST00000396384 2823 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 GINS3-201ENST00000318129 2274 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TRPV1-203ENST00000399759 4092 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 C14orf159-228ENST00000523771 2976 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 DNASE1-201ENST00000246949 4200 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 CUL2-204ENST00000374751 4233 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 FAM98B-203ENST00000491535 3111 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TNFAIP3-210ENST00000620204 3817 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SLAMF7-201ENST00000359331 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms