Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 H2AFZP6-201ENST00000444403 394 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 GCNT1P5-201ENST00000449274 682 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 TRBV26-201ENST00000456572 344 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 RNU7-182P-201ENST00000459009 62 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 RPL7AP10-201ENST00000481016 791 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 AC005017.1-201ENST00000482002 490 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 RN7SKP219-201ENST00000516825 296 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 RNU6-1271P-201ENST00000517049 105 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 NARSP2-201ENST00000518524 679 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 AP000889.2-201ENST00000532684 490 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 AC051619.2-201ENST00000559063 397 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 UBE2Q2P11-201ENST00000559691 205 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 LARP7P2-201ENST00000575306 125 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 AC053481.3-201ENST00000577881 843 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 MIR4680-201ENST00000580906 66 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 AC244100.1-202ENST00000621554 382 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 AC111152.1-202ENST00000635848 339 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 MKI67P1-201ENST00000604297 1460 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.46□□□□□ -1.22
PHOX2BQ99453 CTAGE3P-201ENST00000454280 2404 ntBASIC7.46□□□□□ -1.22
PHOX2BQ99453 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PHOX2BQ99453 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PHOX2BQ99453 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 AC025040.2-201ENST00000558657 1852 ntBASIC7.45□□□□□ -1.22
PHOX2BQ99453 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PHOX2BQ99453 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
PHOX2BQ99453 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PHOX2BQ99453 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PHOX2BQ99453 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PHOX2BQ99453 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PHOX2BQ99453 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 RNA5SP431-201ENST00000410312 120 ntBASIC7.45□□□□□ -1.22
PHOX2BQ99453 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 BRWD1P3-201ENST00000428816 390 ntBASIC7.45□□□□□ -1.22
PHOX2BQ99453 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 AC108734.1-201ENST00000439549 399 ntBASIC7.45□□□□□ -1.22
PHOX2BQ99453 AL161626.1-201ENST00000441480 490 ntBASIC7.45□□□□□ -1.22
PHOX2BQ99453 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 VN1R38P-201ENST00000450265 887 ntBASIC7.45□□□□□ -1.22
PHOX2BQ99453 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 AC124945.1-201ENST00000485133 188 ntBASIC7.45□□□□□ -1.22
PHOX2BQ99453 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 TRBVA-201ENST00000498804 316 ntBASIC7.45□□□□□ -1.22
PHOX2BQ99453 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 OR5D15P-201ENST00000531671 942 ntBASIC7.45□□□□□ -1.22
PHOX2BQ99453 HMGB1P42-201ENST00000532126 553 ntBASIC7.45□□□□□ -1.22
PHOX2BQ99453 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 LSM3P2-201ENST00000551246 273 ntBASIC7.45□□□□□ -1.22
PHOX2BQ99453 IMMP1LP2-201ENST00000552954 492 ntBASIC7.45□□□□□ -1.22
PHOX2BQ99453 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PHOX2BQ99453 MT1CP-201ENST00000567054 174 ntBASIC7.45□□□□□ -1.22
PHOX2BQ99453 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 RPL23AP92-201ENST00000603609 255 ntBASIC7.45□□□□□ -1.22
PHOX2BQ99453 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
PHOX2BQ99453 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms