Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 AC063952.1-203ENST00000634410 658 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AC010624.4-201ENST00000597606 1351 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 CASC19-221ENST00000641309 1382 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 RNU6-289P-201ENST00000364093 107 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 RN7SKP118-201ENST00000364331 330 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 RNU6-657P-201ENST00000383904 107 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 RNU6-769P-201ENST00000384407 104 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 SNORD115.1-201ENST00000391109 76 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 UBBP1-201ENST00000392399 473 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 LDHAP5-201ENST00000394996 622 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AL354751.2-201ENST00000415471 210 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 COX6CP17-201ENST00000421389 185 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 RPL17P49-201ENST00000443728 411 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 RPS7P4-201ENST00000444127 582 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 RPS20P20-201ENST00000460498 340 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 FTH1P8-201ENST00000498161 514 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 FGF7P4-201ENST00000509595 295 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC010486.1-201ENST00000511793 424 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC008562.1-201ENST00000521763 330 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC107954.1-201ENST00000565906 727 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC034268.2-201ENST00000571784 482 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AP001429.1-201ENST00000602568 530 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AL050343.2-201ENST00000607338 280 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC021106.3-201ENST00000623925 531 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 AC009779.8-201ENST00000641684 4384 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
BHLHE41Q9C0J9 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 CASC19-284ENST00000642142 1868 ntBASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 RNU4-79P-201ENST00000362764 141 ntBASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 RNU6-1322P-201ENST00000364309 107 ntBASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 RNU1-149P-201ENST00000390870 161 ntBASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 AL023284.3-201ENST00000407767 334 ntBASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
BHLHE41Q9C0J9 AC023347.2-201ENST00000433994 462 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms