Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RAD17P2-201ENST00000451754 1977 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 AL136146.1-201ENST00000529830 1667 ntBASIC6.93□□□□□ -1.3
USB1Q9BQ65 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC6.93□□□□□ -1.3
USB1Q9BQ65 AC107021.2-201ENST00000567714 2095 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 PTER-203ENST00000423462 3212 ntTSL 3 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 AC133552.3-201ENST00000572236 1869 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 RNU6-641P-201ENST00000384006 107 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 Y_RNA.496-201ENST00000384444 101 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 RPS3AP5-201ENST00000389400 821 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 PKMP3-201ENST00000405497 715 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 RNU4-25P-201ENST00000410569 230 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 IFNA12P-201ENST00000413147 571 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 Z93019.1-201ENST00000416450 973 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 AC109638.1-201ENST00000417406 326 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 RAC1P6-201ENST00000423911 575 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 AL451139.1-201ENST00000434718 346 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 PHBP4-201ENST00000437447 837 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 RPL7AP10-201ENST00000481016 791 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 AC116655.1-201ENST00000508324 901 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 OR5F2P-201ENST00000532761 941 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 GNAI2P1-201ENST00000541815 315 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 U1.22-201ENST00000605806 164 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 AL031666.3-201ENST00000609320 1006 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 AL355810.1-201ENST00000614629 552 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 AC010378.1-201ENST00000619270 362 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 SAMMSON-210ENST00000641260 1308 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 LRRC37A11P-202ENST00000579258 3717 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USB1Q9BQ65 ITPK1-AS1-201ENST00000553639 4701 ntBASIC6.92□□□□□ -1.3
USB1Q9BQ65 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
USB1Q9BQ65 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 SNORD3E-201ENST00000362899 217 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 Y_RNA.117-201ENST00000363294 101 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 RNU6-82P-201ENST00000363970 107 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 RN7SKP47-201ENST00000365347 328 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 RNU6-1207P-201ENST00000384343 107 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 SNORA19-201ENST00000384737 128 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 NDUFS5P1-201ENST00000405668 289 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 PDSS1P1-201ENST00000422953 1114 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 PSMA6P3-201ENST00000428242 164 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USB1Q9BQ65 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 AC002553.2-201ENST00000453217 340 ntBASIC6.91□□□□□ -1.3
USB1Q9BQ65 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC6.91□□□□□ -1.3
USB1Q9BQ65 AC008571.1-201ENST00000467232 300 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms