Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 CYCSP52-201ENST00000422857 310 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 GTF2IP7-202ENST00000436677 309 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 MTCO2P7-201ENST00000446518 666 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL392103.1-201ENST00000447000 198 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 MRPL35P2-201ENST00000448009 511 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 RN7SL51P-201ENST00000468230 285 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AP001804.1-201ENST00000526868 919 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC023575.1-201ENST00000580510 358 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC069366.1-201ENST00000583159 838 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC011471.1-201ENST00000585766 187 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC068313.1-201ENST00000604028 1008 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL031281.1-201ENST00000604049 488 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC009464.1-201ENST00000615731 469 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC009318.4-201ENST00000620496 486 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AL365265.1-201ENST00000621045 234 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 SFTPD-AS1-201ENST00000608229 5001 ntBASIC1.79□□□□□ -2.12
HMCN1Q96RW7 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC1.79□□□□□ -2.12
HMCN1Q96RW7 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 RASSF2-201ENST00000379376 5282 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 TMEM108-211ENST00000515826 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 AC233968.1-201ENST00000611212 1300 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 SREK1-202ENST00000334121 6781 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 RNU6-499P-201ENST00000365615 107 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 AC104297.1-201ENST00000393779 870 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 CISD1P1-201ENST00000393907 327 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 RNA5SP487-201ENST00000410186 122 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 RNA5SP56-201ENST00000410277 118 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 RN7SKP100-201ENST00000411258 284 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 AL121916.1-201ENST00000429405 308 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 RNU6-1218P-201ENST00000458990 108 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 MTND3P24-201ENST00000506306 329 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 OR8I1P-201ENST00000529291 931 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 OR4R2P-201ENST00000530815 597 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 AC068020.1-201ENST00000594215 661 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 VN1R87P-201ENST00000596706 487 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 AC063977.5-201ENST00000601044 974 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 AC130352.1-201ENST00000602979 661 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 GMCL1P2-201ENST00000605230 823 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 AP005229.2-201ENST00000609980 697 ntBASIC1.78□□□□□ -2.12
HMCN1Q96RW7 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 POLR3B-202ENST00000539066 4118 ntTSL 2 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 CSNK1G1-211ENST00000635142 5548 ntTSL 5 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HMCN1Q96RW7 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 150.9 ms