RNA–Protein interactions for RNA: ENST00000365615.1

RNU6-499P-201, Transcript of RNA, U6 small nuclear 499, pseudogene, humanhuman

BASIC

Gene RNU6-499P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-499P-201ENST00000365615 POTEDQ86YR6 584 aa10.86□□□□□ -0.67
RNU6-499P-201ENST00000365615 AEBP2Q6ZN18 517 aaPredicted RBP10.79□□□□□ -0.68
RNU6-499P-201ENST00000365615 CHIC1Q5VXU3 224 aa9.95□□□□□ -0.82
RNU6-499P-201ENST00000365615 SENP3Q9H4L4 574 aaPredicted RBP9.32□□□□□ -0.92
RNU6-499P-201ENST00000365615 PHF23Q9BUL5 403 aaPredicted RBP9.08□□□□□ -0.96
RNU6-499P-201ENST00000365615 FOXD1Q16676 465 aa8.92□□□□□ -0.98
RNU6-499P-201ENST00000365615 MSH5O43196 834 aa8.76□□□□□ -1.01
RNU6-499P-201ENST00000365615 CACNB1Q02641 598 aaPredicted RBP8.37□□□□□ -1.07
RNU6-499P-201ENST00000365615 POTEHQ6S545 545 aa8.23□□□□□ -1.09
RNU6-499P-201ENST00000365615 PIAS4Q8N2W9 510 aaPredicted RBP7.97□□□□□ -1.13
RNU6-499P-201ENST00000365615 RNF39Q9H2S5 420 aa7.4□□□□□ -1.22
RNU6-499P-201ENST00000365615 PPP6R1Q9UPN7 881 aa7.37□□□□□ -1.23
RNU6-499P-201ENST00000365615 PLSCR2Q9NRY7 297 aa7.35□□□□□ -1.23
RNU6-499P-201ENST00000365615 ADRA2BP18089 450 aa7.26□□□□□ -1.25
RNU6-499P-201ENST00000365615 DMRT2Q9Y5R5 561 aa7.21□□□□□ -1.26
RNU6-499P-201ENST00000365615 C1QBPQ07021 282 aaKnown RBP7.19□□□□□ -1.26
RNU6-499P-201ENST00000365615 MAPK8IP2Q13387 824 aaPredicted RBP7.09□□□□□ -1.27
RNU6-499P-201ENST00000365615 SP7Q8TDD2 431 aaPredicted RBP7.09□□□□□ -1.27
RNU6-499P-201ENST00000365615 DCAF8L1A6NGE4 600 aa6.99□□□□□ -1.29
RNU6-499P-201ENST00000365615 LHX8Q68G74 356 aa6.65□□□□□ -1.34
RNU6-499P-201ENST00000365615 CHRDL2Q6WN34 429 aa6.6□□□□□ -1.35
RNU6-499P-201ENST00000365615 SCAF1Q9H7N4 1312 aaKnown RBP6.55□□□□□ -1.36
RNU6-499P-201ENST00000365615 DSG3P32926 999 aa6.51□□□□□ -1.37
RNU6-499P-201ENST00000365615 PLPPR3Q6T4P5 718 aa6.51□□□□□ -1.37
RNU6-499P-201ENST00000365615 HOXD11P31277 338 aaPredicted RBP6.44□□□□□ -1.38
RNU6-499P-201ENST00000365615 HAX1O00165 279 aa6.43□□□□□ -1.38
RNU6-499P-201ENST00000365615 DNAJC5BQ9UF47 199 aa6.43□□□□□ -1.38
RNU6-499P-201ENST00000365615 POTEMA6NI47 508 aa6.33□□□□□ -1.4
RNU6-499P-201ENST00000365615 EVX2Q03828 476 aa6.32□□□□□ -1.4
RNU6-499P-201ENST00000365615 POTEGQ6S5H5 508 aa6.26□□□□□ -1.41
RNU6-499P-201ENST00000365615 PCDH10Q9P2E7 1040 aa6.26□□□□□ -1.41
RNU6-499P-201ENST00000365615 CAPN15O75808 1086 aa6.21□□□□□ -1.42
RNU6-499P-201ENST00000365615 SPINK5Q9NQ38 1064 aaPredicted RBP6.2□□□□□ -1.42
RNU6-499P-201ENST00000365615 PIP4P2Q8N4L2 257 aa6.19□□□□□ -1.42
RNU6-499P-201ENST00000365615 RBM42Q9BTD8 480 aaKnown RBP6.17□□□□□ -1.42
RNU6-499P-201ENST00000365615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.12□□□□□ -1.43
RNU6-499P-201ENST00000365615 GABBR2O75899 941 aa6.05□□□□□ -1.44
RNU6-499P-201ENST00000365615 RNF216Q9NWF9 866 aaPredicted RBP6.02□□□□□ -1.45
RNU6-499P-201ENST00000365615 ABCB7O75027 752 aa5.98□□□□□ -1.45
RNU6-499P-201ENST00000365615 POTEIP0CG38 1075 aa5.94□□□□□ -1.46
RNU6-499P-201ENST00000365615 OTUD5Q96G74 571 aa5.94□□□□□ -1.46
RNU6-499P-201ENST00000365615 FXR2P51116 673 aaKnown RBP eCLIP5.93□□□□□ -1.46
RNU6-499P-201ENST00000365615 U3KPZ7 1027 aaPredicted RBP5.87□□□□□ -1.47
RNU6-499P-201ENST00000365615 TRHP20396 242 aaPredicted RBP5.81□□□□□ -1.48
RNU6-499P-201ENST00000365615 C19orf67A6NJJ6 358 aa5.79□□□□□ -1.48
RNU6-499P-201ENST00000365615 LCE2DQ5TA82 110 aaPredicted RBP5.79□□□□□ -1.48
RNU6-499P-201ENST00000365615 AKT1S1Q96B36 256 aa5.78□□□□□ -1.48
RNU6-499P-201ENST00000365615 REM2Q8IYK8 340 aaPredicted RBP5.77□□□□□ -1.49
RNU6-499P-201ENST00000365615 MMRN1Q13201 1228 aa5.74□□□□□ -1.49
RNU6-499P-201ENST00000365615 CNKSR2Q8WXI2 1034 aa5.74□□□□□ -1.49
RNU6-499P-201ENST00000365615 POTEB2H3BUK9 544 aa5.73□□□□□ -1.49
RNU6-499P-201ENST00000365615 CDAN1Q8IWY9 1227 aa5.72□□□□□ -1.49
RNU6-499P-201ENST00000365615 PITPNM1O00562 1244 aa5.71□□□□□ -1.5
RNU6-499P-201ENST00000365615 FAM163AQ96GL9 167 aaPredicted RBP5.68□□□□□ -1.5
RNU6-499P-201ENST00000365615 ZNF219Q9P2Y4 722 aaPredicted RBP5.68□□□□□ -1.5
RNU6-499P-201ENST00000365615 SPNS2Q8IVW8 549 aa5.61□□□□□ -1.51
RNU6-499P-201ENST00000365615 PPP4R3CPQ6ZMV5 832 aa5.57□□□□□ -1.52
RNU6-499P-201ENST00000365615 DCBLD2Q96PD2 775 aa5.56□□□□□ -1.52
RNU6-499P-201ENST00000365615 PRKAR2AP13861 404 aaKnown RBP5.55□□□□□ -1.52
RNU6-499P-201ENST00000365615 APLP2Q06481 763 aa5.46□□□□□ -1.54
RNU6-499P-201ENST00000365615 POTEJP0CG39 1038 aa5.42□□□□□ -1.54
RNU6-499P-201ENST00000365615 CLCN6P51797 869 aa5.41□□□□□ -1.54
RNU6-499P-201ENST00000365615 POLA2Q14181 598 aa5.37□□□□□ -1.55
RNU6-499P-201ENST00000365615 MAMSTRQ6ZN01 415 aa5.33□□□□□ -1.56
RNU6-499P-201ENST00000365615 CD44P16070 742 aaKnown RBP5.28□□□□□ -1.56
RNU6-499P-201ENST00000365615 PELP1Q8IZL8 1130 aaKnown RBP5.26□□□□□ -1.57
RNU6-499P-201ENST00000365615 CHADLQ6NUI6 762 aa5.24□□□□□ -1.57
RNU6-499P-201ENST00000365615 OSCARQ8IYS5 282 aa5.22□□□□□ -1.57
RNU6-499P-201ENST00000365615 SCUBE2Q9NQ36 999 aa5.22□□□□□ -1.57
RNU6-499P-201ENST00000365615 ST18O60284 1047 aa5.2□□□□□ -1.58
RNU6-499P-201ENST00000365615 GALR2O43603 387 aaPredicted RBP5.19□□□□□ -1.58
RNU6-499P-201ENST00000365615 CLEC11AQ9Y240 323 aa5.17□□□□□ -1.58
RNU6-499P-201ENST00000365615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.16□□□□□ -1.58
RNU6-499P-201ENST00000365615 HNRNPUL2Q1KMD3 747 aaKnown RBP5.16□□□□□ -1.58
RNU6-499P-201ENST00000365615 METRNQ9UJH8 293 aa5.16□□□□□ -1.58
RNU6-499P-201ENST00000365615 ZNF579Q8NAF0 562 aaKnown RBP5.12□□□□□ -1.59
RNU6-499P-201ENST00000365615 C7P10643 843 aa5.1□□□□□ -1.59
RNU6-499P-201ENST00000365615 SAMD1Q6SPF0 538 aaPredicted RBP5.08□□□□□ -1.6
RNU6-499P-201ENST00000365615 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
RNU6-499P-201ENST00000365615 SPDYE1Q8NFV5 336 aaPredicted RBP5.07□□□□□ -1.6
RNU6-499P-201ENST00000365615 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
RNU6-499P-201ENST00000365615 SLC39A7Q92504 469 aa5.06□□□□□ -1.6
RNU6-499P-201ENST00000365615 KRTAP3-3Q9BYR6 98 aa5.05□□□□□ -1.6
RNU6-499P-201ENST00000365615 KRTAP3-2Q9BYR7 98 aa5.05□□□□□ -1.6
RNU6-499P-201ENST00000365615 ZBTB12Q9Y330 459 aaPredicted RBP5.05□□□□□ -1.6
RNU6-499P-201ENST00000365615 SLC4A2P04920 1241 aa5.03□□□□□ -1.6
RNU6-499P-201ENST00000365615 ZRANB1Q9UGI0 708 aa5.01□□□□□ -1.61
RNU6-499P-201ENST00000365615 FARP1Q9Y4F1 1045 aaPredicted RBP4.99□□□□□ -1.61
RNU6-499P-201ENST00000365615 ASTLQ6HA08 431 aaPredicted RBP4.97□□□□□ -1.61
RNU6-499P-201ENST00000365615 MARVELD3Q96A59 401 aa4.97□□□□□ -1.61
RNU6-499P-201ENST00000365615 RNF166Q96A37 237 aaPredicted RBP4.96□□□□□ -1.62
RNU6-499P-201ENST00000365615 TMEM121BQ9BXQ6 578 aaPredicted RBP4.96□□□□□ -1.62
RNU6-499P-201ENST00000365615 POTEFA5A3E0 1075 aa4.95□□□□□ -1.62
RNU6-499P-201ENST00000365615 ATMINO43313 823 aaPredicted RBP4.95□□□□□ -1.62
RNU6-499P-201ENST00000365615 NCBP3Q53F19 620 aaKnown RBP4.9□□□□□ -1.63
RNU6-499P-201ENST00000365615 POTEB3A0JP26 581 aa4.89□□□□□ -1.63
RNU6-499P-201ENST00000365615 NPM3O75607 178 aaKnown RBP4.89□□□□□ -1.63
RNU6-499P-201ENST00000365615 PRR29P0C7W0 189 aa4.89□□□□□ -1.63
RNU6-499P-201ENST00000365615 POTEBQ6S5H4 581 aa4.89□□□□□ -1.63
RNU6-499P-201ENST00000365615 SLAIN1Q8ND83 568 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms