Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 AC092905.1-201ENST00000467527 949 ntBASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 RN7SL629P-201ENST00000489622 285 ntBASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 AC025164.1-201ENST00000496249 478 ntBASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 AC117525.1-201ENST00000515228 503 ntBASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 IGKV2-18-201ENST00000522607 343 ntBASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 AC090819.1-201ENST00000523800 1111 ntBASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 SUGT1P3-202ENST00000604259 383 ntBASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 AC138473.1-201ENST00000605717 526 ntBASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 AC022467.1-201ENST00000614738 749 ntBASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 RPL23AP61-201ENST00000623642 466 ntBASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RBFOX3A6NFN3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 RNU1-63P-201ENST00000383902 164 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 SNORA67-201ENST00000384423 137 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AL391422.1-201ENST00000402155 436 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AL391361.1-201ENST00000405580 489 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 RNA5SP306-201ENST00000411087 107 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 RPA2P2-201ENST00000419698 796 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC048351.1-201ENST00000420064 602 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC062016.2-201ENST00000420950 676 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 SEC63P1-201ENST00000425785 1258 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 BTG3P1-201ENST00000435859 716 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 BUD31P2-201ENST00000449374 300 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 PPIAP21-201ENST00000464473 501 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 RPL23AP71-201ENST00000470966 469 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC083829.1-201ENST00000503756 657 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC017037.1-201ENST00000508460 471 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 SNORD116-26-201ENST00000516006 96 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 RN7SKP260-201ENST00000516907 149 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 IGLVIV-53-201ENST00000520107 367 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC126177.5-201ENST00000549599 178 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AL049779.2-201ENST00000553847 315 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC020914.4-201ENST00000597690 277 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 MTCO2P22-201ENST00000603246 681 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC103792.1-201ENST00000603591 919 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC010201.1-201ENST00000605051 540 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC012603.1-201ENST00000606424 528 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC008115.4-201ENST00000619780 775 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 MIR6886-201ENST00000619864 61 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AL592437.2-201ENST00000421655 2434 ntBASIC3.6□□□□□ -1.83
RBFOX3A6NFN3 AL031985.3-201ENST00000565390 2449 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms