Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RASGRP3-201ENST00000402538 4738 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01845-201ENST00000518418 2012 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 NAALAD2-210ENST00000534061 3600 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RSU1-205ENST00000602389 3639 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF544-215ENST00000599953 2274 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 BBS9-202ENST00000350941 3899 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 MAB21L1-201ENST00000379919 3028 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 PPFIBP2-224ENST00000533792 3003 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AL161912.2-201ENST00000565707 3007 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 DDX3X-216ENST00000626301 3013 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TNFRSF19-201ENST00000248484 3276 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LARS2-201ENST00000265537 4281 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 PDILT-201ENST00000302451 2153 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 OPRM1-202ENST00000330432 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 MCTP1-205ENST00000505208 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC02145-202ENST00000507444 2419 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 VOPP1-208ENST00000433959 2900 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 BTBD18-202ENST00000436147 2947 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF438-205ENST00000436087 3164 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 EPB41L5-204ENST00000443902 3167 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 EYA1-204ENST00000388741 3404 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AP004782.1-201ENST00000623990 3433 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LRRC37A6P-202ENST00000448648 5444 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RAB36-201ENST00000263116 3828 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 PDGFD-202ENST00000393158 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TNFAIP3-208ENST00000615468 3818 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 CHST15-205ENST00000628426 3553 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 DZANK1-204ENST00000358866 3310 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RAD17-205ENST00000354868 3060 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TDRD3-208ENST00000535286 2579 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 NEK6-215ENST00000546191 2580 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 FOXP1-205ENST00000468577 1842 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ILK-210ENST00000528995 1559 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 CRX-201ENST00000221996 4470 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TATDN2-203ENST00000448281 4484 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC136944.2-201ENST00000568752 3971 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AP2M1-222ENST00000621863 1305 ntAPPRIS ALT1 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 MAP4-205ENST00000420772 3478 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 PPP1R2-206ENST00000618156 3450 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF248-203ENST00000395867 5141 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ADAM30-201ENST00000369400 2963 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 CCPG1-212ENST00000569205 2970 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC134508.1-201ENST00000570082 2977 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC020978.10-201ENST00000623181 2704 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 CACNB2-216ENST00000617363 4385 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01654-201ENST00000569711 2471 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LRTOMT-202ENST00000307198 3604 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TIMP2-204ENST00000586057 3389 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF271P-202ENST00000465539 1970 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LARP1B-210ENST00000512292 3105 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 PPP3CB-AS1-203ENST00000442133 2888 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL359091.1-201ENST00000449048 1734 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 BDKRB2-203ENST00000554311 4040 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TCP11L1-202ENST00000432887 2633 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 THOC5-204ENST00000397873 2374 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 C8B-206ENST00000543257 2382 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 PAQR7-201ENST00000374296 3297 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 GOSR2-220ENST00000638838 3266 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 PCDH11Y-207ENST00000622698 4824 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 PSEN1-204ENST00000394164 3046 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TCF4-231ENST00000566279 2128 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 PRDM9-201ENST00000296682 3691 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 FAM161B-201ENST00000286544 4078 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 LARS2-203ENST00000415258 4744 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ZC3H14-211ENST00000555755 2529 ntAPPRIS ALT1 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TBC1D14-207ENST00000448507 4887 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TSNAXIP1-206ENST00000561639 2258 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 CHRM3-207ENST00000615928 2294 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AP002833.3-201ENST00000625075 2265 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 DCBLD2-202ENST00000326857 3959 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC02028-202ENST00000432154 2666 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 OSBPL6-204ENST00000359685 7114 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SEC22C-201ENST00000264454 1380 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms