Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH12P55289 AC138907.10-201ENST00000623708 983 ntBASIC4.78□□□□□ -1.64
CDH12P55289 BX649567.1-201ENST00000642071 1134 ntBASIC4.78□□□□□ -1.64
CDH12P55289 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH12P55289 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH12P55289 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH12P55289 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDH12P55289 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH12P55289 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDH12P55289 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH12P55289 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH12P55289 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH12P55289 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CDH12P55289 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
CDH12P55289 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH12P55289 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH12P55289 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH12P55289 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH12P55289 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH12P55289 RNY3P9-201ENST00000384727 106 ntBASIC4.77□□□□□ -1.65
CDH12P55289 RNA5SP339-201ENST00000390987 122 ntBASIC4.77□□□□□ -1.65
CDH12P55289 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH12P55289 TAF13P2-201ENST00000416876 286 ntBASIC4.77□□□□□ -1.65
CDH12P55289 AL133325.1-201ENST00000421090 382 ntBASIC4.77□□□□□ -1.65
CDH12P55289 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH12P55289 OR2AH1P-201ENST00000425717 928 ntBASIC4.77□□□□□ -1.65
CDH12P55289 AC009238.2-201ENST00000431026 355 ntBASIC4.77□□□□□ -1.65
CDH12P55289 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH12P55289 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH12P55289 CYCSP6-201ENST00000434498 302 ntBASIC4.77□□□□□ -1.65
CDH12P55289 AC084290.1-201ENST00000434995 374 ntBASIC4.77□□□□□ -1.65
CDH12P55289 NANOGP2-201ENST00000435391 727 ntBASIC4.77□□□□□ -1.65
CDH12P55289 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH12P55289 CYCSP12-201ENST00000437729 300 ntBASIC4.77□□□□□ -1.65
CDH12P55289 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH12P55289 AC092170.1-201ENST00000440211 356 ntBASIC4.77□□□□□ -1.65
CDH12P55289 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH12P55289 ARL5AP2-201ENST00000444698 533 ntBASIC4.77□□□□□ -1.65
CDH12P55289 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH12P55289 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.77□□□□□ -1.65
CDH12P55289 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH12P55289 OR2AF1P-201ENST00000454899 889 ntBASIC4.77□□□□□ -1.65
CDH12P55289 SEPT7P3-201ENST00000455017 621 ntBASIC4.77□□□□□ -1.65
CDH12P55289 AC005410.1-202ENST00000460347 485 ntBASIC4.77□□□□□ -1.65
CDH12P55289 AC004815.1-201ENST00000484185 331 ntBASIC4.77□□□□□ -1.65
CDH12P55289 RN7SL547P-201ENST00000490793 290 ntBASIC4.77□□□□□ -1.65
CDH12P55289 MTATP6P1-201ENST00000514057 681 ntBASIC4.77□□□□□ -1.65
CDH12P55289 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH12P55289 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH12P55289 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH12P55289 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH12P55289 AC008083.2-201ENST00000546707 476 ntBASIC4.77□□□□□ -1.65
CDH12P55289 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH12P55289 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH12P55289 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH12P55289 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH12P55289 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH12P55289 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
CDH12P55289 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH12P55289 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH12P55289 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH12P55289 VN1R78P-201ENST00000597393 564 ntBASIC4.77□□□□□ -1.65
CDH12P55289 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH12P55289 DUXAP3-201ENST00000603616 594 ntBASIC4.77□□□□□ -1.65
CDH12P55289 AC009237.15-201ENST00000610252 501 ntBASIC4.77□□□□□ -1.65
CDH12P55289 AC015914.2-201ENST00000618167 288 ntBASIC4.77□□□□□ -1.65
CDH12P55289 AC007342.8-201ENST00000623278 678 ntBASIC4.77□□□□□ -1.65
CDH12P55289 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH12P55289 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH12P55289 AC074101.1-201ENST00000637861 241 ntBASIC4.77□□□□□ -1.65
CDH12P55289 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH12P55289 GTF2H2B-203ENST00000508065 1432 ntBASIC4.77□□□□□ -1.65
CDH12P55289 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CDH12P55289 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CDH12P55289 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CDH12P55289 AC111188.2-201ENST00000529697 1387 ntBASIC4.77□□□□□ -1.65
CDH12P55289 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CDH12P55289 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH12P55289 OR55B1P-203ENST00000641518 2602 ntBASIC4.76□□□□□ -1.65
CDH12P55289 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH12P55289 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH12P55289 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH12P55289 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CDH12P55289 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH12P55289 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH12P55289 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH12P55289 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CDH12P55289 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CDH12P55289 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH12P55289 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH12P55289 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
CDH12P55289 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH12P55289 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH12P55289 ENSAP3-201ENST00000312710 333 ntBASIC4.76□□□□□ -1.65
CDH12P55289 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH12P55289 RNU4-40P-201ENST00000364351 143 ntBASIC4.76□□□□□ -1.65
CDH12P55289 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CDH12P55289 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH12P55289 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH12P55289 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms