Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 BCLAF1P2-201ENST00000624956 2609 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC016588.2-201ENST00000632484 3021 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 BMPR1APS1-201ENST00000403332 1598 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 TLK1P1-201ENST00000456760 2440 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 OR5P1P-201ENST00000299512 925 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 RN7SKP202-201ENST00000410439 330 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 NPM1P18-201ENST00000434232 732 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 RNA5SP464-201ENST00000516251 108 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 MIR3944-201ENST00000581277 108 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC032011.1-201ENST00000611703 1549 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 TTC39DP-201ENST00000416781 1688 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC092681.1-201ENST00000297369 291 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 GCA-203ENST00000429691 824 ntTSL 3 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AL591623.2-201ENST00000449978 222 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 RN7SL517P-201ENST00000462240 305 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 RPL23AP2-201ENST00000471227 466 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 MIR3939-201ENST00000582614 106 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AL157762.1-201ENST00000619612 415 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 RNA5SP283-201ENST00000365604 119 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 RNA5SP151-201ENST00000365632 117 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 RN7SL176P-201ENST00000580352 264 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 VN1R85P-201ENST00000601587 426 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC099654.3-201ENST00000447087 1546 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 SNORA63.1-201ENST00000362493 131 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 NPM1P38-201ENST00000403835 865 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 E2F6P2-201ENST00000420708 748 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 MIR4472-2-201ENST00000582069 67 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 OR2BH1P-201ENST00000608850 864 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC107068.1-201ENST00000563286 4218 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AL592148.3-201ENST00000608771 2646 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 OR4K15-201ENST00000305051 1216 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 RNA5SP223-201ENST00000365174 120 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 SNORA70C-201ENST00000384538 135 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 TCEA1P3-201ENST00000443005 880 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 RN7SL542P-201ENST00000467147 294 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 RNU1-103P-201ENST00000516502 125 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 TRAV8-5-201ENST00000537369 341 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 MIR3200-201ENST00000580767 85 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC104260.2-201ENST00000623551 3497 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 RNU6-525P-201ENST00000363685 104 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms