Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HSPG2P98160 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC2.62□□□□□ -1.99
HSPG2P98160 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
HSPG2P98160 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC2.62□□□□□ -1.99
HSPG2P98160 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC2.62□□□□□ -1.99
HSPG2P98160 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HSPG2P98160 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HSPG2P98160 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HSPG2P98160 AC083899.2-201ENST00000423285 1376 ntBASIC2.62□□□□□ -1.99
HSPG2P98160 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC2.62□□□□□ -1.99
HSPG2P98160 LINC02035-201ENST00000610128 5476 ntBASIC2.62□□□□□ -1.99
HSPG2P98160 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HSPG2P98160 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HSPG2P98160 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.61□□□□□ -1.99
HSPG2P98160 AL731532.1-201ENST00000623972 4236 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 SNX18P3-202ENST00000565670 1750 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC2.61□□□□□ -1.99
HSPG2P98160 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.61□□□□□ -1.99
HSPG2P98160 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.61□□□□□ -1.99
HSPG2P98160 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.61□□□□□ -1.99
HSPG2P98160 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.61□□□□□ -1.99
HSPG2P98160 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.61□□□□□ -1.99
HSPG2P98160 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.61□□□□□ -1.99
HSPG2P98160 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC2.61□□□□□ -1.99
HSPG2P98160 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
HSPG2P98160 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 AC100778.3-201ENST00000580060 1750 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC2.61□□□□□ -1.99
HSPG2P98160 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HSPG2P98160 MTCO1P12-201ENST00000414273 1543 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC2.61□□□□□ -1.99
HSPG2P98160 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 OR5BE1P-201ENST00000425977 939 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC2.61□□□□□ -1.99
HSPG2P98160 RPS26P28-201ENST00000470806 348 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.61□□□□□ -1.99
HSPG2P98160 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.61□□□□□ -1.99
HSPG2P98160 AC037471.2-201ENST00000564941 598 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 OR5BE1P-202ENST00000641168 1176 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HSPG2P98160 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
HSPG2P98160 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
HSPG2P98160 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.61□□□□□ -1.99
HSPG2P98160 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
HSPG2P98160 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
HSPG2P98160 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC2.61□□□□□ -1.99
HSPG2P98160 PRO1804-201ENST00000623780 2050 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HSPG2P98160 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC2.61□□□□□ -1.99
HSPG2P98160 AC010374.1-201ENST00000503762 1237 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 RN7SKP57-201ENST00000517248 293 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC2.61□□□□□ -1.99
HSPG2P98160 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC2.61□□□□□ -1.99
HSPG2P98160 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HSPG2P98160 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
HSPG2P98160 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HSPG2P98160 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HSPG2P98160 SNORD3H-201ENST00000384486 214 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 RPL21P67-201ENST00000402896 478 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.61□□□□□ -1.99
HSPG2P98160 AC110792.1-201ENST00000491826 472 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC2.61□□□□□ -1.99
HSPG2P98160 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.61□□□□□ -1.99
HSPG2P98160 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC2.61□□□□□ -1.99
HSPG2P98160 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC2.61□□□□□ -1.99
HSPG2P98160 Z98200.1-201ENST00000607298 470 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 FRG1EP-201ENST00000634469 770 ntBASIC2.61□□□□□ -1.99
HSPG2P98160 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
HSPG2P98160 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
HSPG2P98160 BMPR1APS1-201ENST00000403332 1598 ntBASIC2.6□□□□□ -1.99
HSPG2P98160 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
HSPG2P98160 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.6□□□□□ -1.99
HSPG2P98160 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
HSPG2P98160 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HSPG2P98160 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HSPG2P98160 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HSPG2P98160 AL391219.1-201ENST00000422570 483 ntBASIC2.6□□□□□ -1.99
HSPG2P98160 AC104333.2-201ENST00000422630 192 ntBASIC2.6□□□□□ -1.99
HSPG2P98160 RPL12P46-201ENST00000436610 195 ntBASIC2.6□□□□□ -1.99
HSPG2P98160 GTF2IP8-201ENST00000560687 584 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms