Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC011472.4-201ENST00000615848 491 ntBASIC5.2□□□□□ -1.58
PTPN9P43378 AP004607.9-201ENST00000618202 316 ntBASIC5.2□□□□□ -1.58
PTPN9P43378 AC068787.1-201ENST00000623908 691 ntBASIC5.2□□□□□ -1.58
PTPN9P43378 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.2□□□□□ -1.58
PTPN9P43378 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.2□□□□□ -1.58
PTPN9P43378 AC132825.7-201ENST00000638744 335 ntBASIC5.2□□□□□ -1.58
PTPN9P43378 HSPA8P18-201ENST00000439846 1928 ntBASIC5.2□□□□□ -1.58
PTPN9P43378 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN9P43378 AL132640.2-201ENST00000559968 1698 ntBASIC5.2□□□□□ -1.58
PTPN9P43378 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN9P43378 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN9P43378 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTPN9P43378 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.2□□□□□ -1.58
PTPN9P43378 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PTPN9P43378 AC007996.1-201ENST00000620414 2821 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN9P43378 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
PTPN9P43378 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN9P43378 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN9P43378 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN9P43378 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN9P43378 METTL21EP-201ENST00000298105 713 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PTPN9P43378 RNA5SP305-201ENST00000362665 119 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PTPN9P43378 RPL5P19-201ENST00000404228 893 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN9P43378 GJA6P-201ENST00000415117 1042 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.19□□□□□ -1.58
PTPN9P43378 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN9P43378 AC093422.3-201ENST00000428506 305 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.19□□□□□ -1.58
PTPN9P43378 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.19□□□□□ -1.58
PTPN9P43378 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN9P43378 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN9P43378 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN9P43378 YWHAZP2-201ENST00000440317 728 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN9P43378 AC097499.1-201ENST00000444277 208 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 RPL34P26-201ENST00000445636 354 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN9P43378 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.19□□□□□ -1.58
PTPN9P43378 OFD1P3Y-201ENST00000453312 783 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 RN7SL517P-201ENST00000462240 305 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 AC004815.1-201ENST00000484185 331 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.19□□□□□ -1.58
PTPN9P43378 SUMO2P5-201ENST00000506790 245 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 RN7SKP66-201ENST00000516681 231 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN9P43378 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN9P43378 MTND1P24-201ENST00000552175 861 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.19□□□□□ -1.58
PTPN9P43378 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PTPN9P43378 AL049838.1-201ENST00000563647 981 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 TVP23CP2-201ENST00000571473 623 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN9P43378 MEMO1P5-201ENST00000604810 406 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 AC087783.2-201ENST00000605070 562 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 AC013244.3-201ENST00000605614 388 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 AC063944.3-201ENST00000609969 533 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 AL049794.2-201ENST00000616301 365 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 AP002799.1-201ENST00000623552 423 ntBASIC5.19□□□□□ -1.58
PTPN9P43378 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN9P43378 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN9P43378 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.19□□□□□ -1.58
PTPN9P43378 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
PTPN9P43378 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN9P43378 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.19□□□□□ -1.58
PTPN9P43378 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTPN9P43378 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN9P43378 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.18□□□□□ -1.58
PTPN9P43378 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PTPN9P43378 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PTPN9P43378 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN9P43378 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.18□□□□□ -1.58
PTPN9P43378 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.18□□□□□ -1.58
PTPN9P43378 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN9P43378 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PTPN9P43378 RNU6-298P-201ENST00000390888 96 ntBASIC5.18□□□□□ -1.58
PTPN9P43378 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.18□□□□□ -1.58
PTPN9P43378 RPS27AP11-201ENST00000402798 447 ntBASIC5.18□□□□□ -1.58
PTPN9P43378 ATF1P1-201ENST00000406040 927 ntBASIC5.18□□□□□ -1.58
PTPN9P43378 RN7SKP213-201ENST00000410746 298 ntBASIC5.18□□□□□ -1.58
PTPN9P43378 BMS1P13-201ENST00000417301 885 ntBASIC5.18□□□□□ -1.58
PTPN9P43378 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN9P43378 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN9P43378 AL627308.1-201ENST00000435693 821 ntBASIC5.18□□□□□ -1.58
PTPN9P43378 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.18□□□□□ -1.58
PTPN9P43378 AC073052.1-201ENST00000440417 714 ntBASIC5.18□□□□□ -1.58
PTPN9P43378 AL137845.2-201ENST00000444292 988 ntBASIC5.18□□□□□ -1.58
PTPN9P43378 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.18□□□□□ -1.58
PTPN9P43378 AC093166.2-201ENST00000455969 1017 ntBASIC5.18□□□□□ -1.58
PTPN9P43378 RPSAP50-201ENST00000481955 852 ntBASIC5.18□□□□□ -1.58
PTPN9P43378 RN7SL97P-201ENST00000486780 299 ntBASIC5.18□□□□□ -1.58
PTPN9P43378 RN7SL214P-201ENST00000487317 265 ntBASIC5.18□□□□□ -1.58
PTPN9P43378 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.18□□□□□ -1.58
PTPN9P43378 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.18□□□□□ -1.58
PTPN9P43378 AC093890.1-201ENST00000502554 540 ntBASIC5.18□□□□□ -1.58
PTPN9P43378 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms