Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 TLK1P1-201ENST00000456760 2440 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CASC19-284ENST00000642142 1868 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MAPK10-349ENST00000641767 3661 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RNU6-666P-201ENST00000363499 107 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RNU6-1005P-201ENST00000384519 107 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MIR320B1-201ENST00000390209 79 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LINC00993-201ENST00000420453 540 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 OR2AM1P-201ENST00000422137 422 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MTCO1P52-201ENST00000433928 531 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC093414.1-201ENST00000434712 514 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC144530.1-201ENST00000452862 555 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC008379.1-201ENST00000463655 464 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RN7SL222P-201ENST00000476452 299 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 BX284632.1-201ENST00000478218 541 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC090114.3-201ENST00000479267 829 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RPL21P47-201ENST00000483696 477 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC104971.1-201ENST00000495117 578 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AP003355.1-201ENST00000518956 587 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC018442.3-201ENST00000523025 183 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CD24P2-201ENST00000565486 219 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MIR4675-201ENST00000577898 77 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SS18L2P2-201ENST00000583960 235 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC011374.2-201ENST00000607135 526 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 uc_338.18-201ENST00000615451 175 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC016957.2-201ENST00000616998 848 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC145207.9-201ENST00000623802 325 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MFSD8-213ENST00000641134 1327 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC083899.2-201ENST00000423285 1376 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC093775.1-201ENST00000624154 1868 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AP001273.1-201ENST00000624493 3152 ntBASIC4.37□□□□□ -1.71
TRBV4-1A0A0J9YWV2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MIR195-201ENST00000385194 87 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 VDAC2P1-201ENST00000399358 958 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MIR1286-201ENST00000408112 78 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RN7SKP222-201ENST00000410651 315 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RNA5SP498-201ENST00000411342 120 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 Z74021.1-201ENST00000423610 407 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL645608.4-201ENST00000423619 154 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC079807.1-201ENST00000429993 481 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AL591363.1-201ENST00000450091 483 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 CYCSP42-201ENST00000450823 238 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 HMGB1P26-201ENST00000452520 628 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC096741.1-201ENST00000472250 846 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 COPS8P2-201ENST00000473228 627 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RPS18P6-201ENST00000476880 458 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 OR5H3P-201ENST00000502817 919 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 RPS27AP18-201ENST00000515536 459 ntBASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.36□□□□□ -1.71
TRBV4-1A0A0J9YWV2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms