Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC068870.3-201ENST00000625077 2536 ntBASIC6.82□□□□□ -1.32
CNTN3Q9P232 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CNTN3Q9P232 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CNTN3Q9P232 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CNTN3Q9P232 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNTN3Q9P232 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTN3Q9P232 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTN3Q9P232 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTN3Q9P232 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 FAM32BP-201ENST00000344033 333 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTN3Q9P232 Y_RNA.296-201ENST00000364930 108 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTN3Q9P232 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTN3Q9P232 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 MTCO3P40-201ENST00000392516 676 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 CLUHP1-201ENST00000435012 1190 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 PCNPP2-201ENST00000441651 455 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC112206.1-201ENST00000468416 477 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 SNX18P24-201ENST00000505249 671 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC108078.1-201ENST00000508073 725 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 RPL7L1P13-201ENST00000511702 739 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC138832.1-201ENST00000522871 556 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC005363.1-201ENST00000530779 351 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC073916.1-201ENST00000545095 130 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC008083.2-201ENST00000546707 476 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC002310.3-201ENST00000569728 723 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC008752.3-201ENST00000588113 712 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AL359535.1-201ENST00000612100 1087 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 AP001506.1-201ENST00000615444 211 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 AP003122.6-201ENST00000623831 495 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 AL031985.3-201ENST00000565390 2449 ntBASIC6.81□□□□□ -1.32
CNTN3Q9P232 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.81□□□□□ -1.32
CNTN3Q9P232 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNTN3Q9P232 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNTN3Q9P232 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC110373.1-201ENST00000505994 3505 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 MIR137-201ENST00000385223 102 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 RPL23AP29-201ENST00000397284 453 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 IFIT1P1-201ENST00000400497 1449 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 IGLV3-4-201ENST00000432300 244 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 MORF4-201ENST00000447135 971 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 HIGD1AP16-201ENST00000450986 258 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 Z83838.1-202ENST00000456225 839 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CNTN3Q9P232 MTND6P8-201ENST00000503471 522 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 OR7E99P-201ENST00000505750 922 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC024589.1-201ENST00000512207 263 ntBASIC6.8□□□□□ -1.32
CNTN3Q9P232 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.8□□□□□ -1.32
CNTN3Q9P232 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms