Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SYT14-202ENST00000367019 2997 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF691-203ENST00000372504 1935 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SERPINA3-202ENST00000393080 1581 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 NR2C2-202ENST00000393102 1937 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 GRB10-210ENST00000407526 2279 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC00608-201ENST00000419101 2254 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 MTF2-214ENST00000545708 4046 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 EDA-213ENST00000616899 4643 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 MAB21L3-201ENST00000369500 3229 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RAD17-213ENST00000509734 3233 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 GOLGA6D-202ENST00000618219 3210 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 EGF-201ENST00000265171 4880 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ATP13A4-201ENST00000295548 2157 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TRAF3IP2-208ENST00000392556 2188 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZFY-204ENST00000449237 3464 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RPL4-201ENST00000307961 2769 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ARHGEF9-225ENST00000636276 4097 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 NOLC1-207ENST00000488254 2441 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01140-206ENST00000484933 3368 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC104667.1-201ENST00000417947 2057 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 NSUN4-209ENST00000537428 2087 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC132825.4-201ENST00000582527 3644 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 NACA-201ENST00000356769 2690 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 C14orf159-217ENST00000520328 2687 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SLF2-203ENST00000370271 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 C11orf44-201ENST00000317019 3547 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AGBL3-203ENST00000436302 3533 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SEC14L3-203ENST00000402286 1964 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SYNE1-203ENST00000354674 3154 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TMEM39A-201ENST00000319172 4369 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 EXD2-202ENST00000409014 3404 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 E2F8-202ENST00000527884 3432 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TTC3P1-201ENST00000399586 6081 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 PSMF1-202ENST00000333082 3686 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 FAM162A-203ENST00000477892 3052 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 GADL1-202ENST00000454381 4509 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 OR2B11-203ENST00000641527 4545 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 IFIT3-202ENST00000371818 2496 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TXNL4B-202ENST00000423037 2490 ntAPPRIS P1 TSL 4 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 EYA1-201ENST00000303824 3930 ntAPPRIS ALT1 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AP3B2-209ENST00000542200 3921 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC011337.1-201ENST00000606930 3317 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 WDR83OS-201ENST00000222190 599 ntAPPRIS ALT1 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SAT2-201ENST00000269298 946 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SPRR1B-201ENST00000307098 620 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TRAPPC4-201ENST00000359005 849 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 Y_RNA.37-201ENST00000362606 108 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNA5SP361-201ENST00000362686 118 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 Y_RNA.95-201ENST00000363079 95 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SNORD115-14-201ENST00000363090 81 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-251P-201ENST00000363235 104 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SKP145-201ENST00000363291 303 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU4-13P-201ENST00000364019 141 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNA5SP394-201ENST00000364216 119 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SNORD115-31-201ENST00000365318 82 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 U3.15-201ENST00000365398 212 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 Y_RNA.366-201ENST00000365540 102 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AIF1L-202ENST00000372297 418 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 GHRH-202ENST00000373611 377 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-31P-201ENST00000384388 108 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-843P-201ENST00000384454 104 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU1-149P-201ENST00000390870 161 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-278P-201ENST00000390945 109 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU1-139P-201ENST00000391307 165 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SPAG11B-205ENST00000398462 655 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 FTH1P15-201ENST00000406984 280 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC25A20P1-201ENST00000408043 903 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU2-40P-201ENST00000410833 196 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SKP91-201ENST00000410852 288 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC007064.1-201ENST00000412238 351 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 YPEL5P1-201ENST00000419731 367 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 PGAM4P1-201ENST00000426407 654 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01779-201ENST00000426515 914 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 FO393419.3-201ENST00000428741 282 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC068287.1-201ENST00000430283 295 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 MRPL52-205ENST00000432849 411 ntTSL 2 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms