Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.74□□□□□ -1.65
RIPK2O43353 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.74□□□□□ -1.65
RIPK2O43353 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RIPK2O43353 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RIPK2O43353 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RIPK2O43353 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.74□□□□□ -1.65
RIPK2O43353 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.73□□□□□ -1.65
RIPK2O43353 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.73□□□□□ -1.65
RIPK2O43353 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.73□□□□□ -1.65
RIPK2O43353 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
RIPK2O43353 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
RIPK2O43353 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RIPK2O43353 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
RIPK2O43353 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RIPK2O43353 SNORA74A-201ENST00000364089 198 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 RNU6-819P-201ENST00000364116 107 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 RNU1-82P-201ENST00000390851 165 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 RN7SKP216-201ENST00000411050 312 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RIPK2O43353 GAPDHP49-201ENST00000421421 961 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 AL138785.1-201ENST00000425821 331 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 HMGB1P32-201ENST00000425971 565 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RIPK2O43353 RPS29P14-201ENST00000431518 171 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RIPK2O43353 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RIPK2O43353 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.73□□□□□ -1.65
RIPK2O43353 RPS27AP15-201ENST00000447672 466 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 FAR2P1-206ENST00000449736 709 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 MYO5BP2-201ENST00000449815 1277 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 RPL7P31-201ENST00000450192 724 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 AC079168.2-201ENST00000453977 416 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 AC008897.1-201ENST00000494006 347 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 SNRPCP2-201ENST00000504370 475 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 AC091868.1-201ENST00000508746 304 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.73□□□□□ -1.65
RIPK2O43353 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.73□□□□□ -1.65
RIPK2O43353 SNORA70.17-201ENST00000516449 133 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 RNA5SP360-201ENST00000516555 118 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.73□□□□□ -1.65
RIPK2O43353 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.73□□□□□ -1.65
RIPK2O43353 OR10G5P-201ENST00000532733 358 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.73□□□□□ -1.65
RIPK2O43353 DYNLL1P4-201ENST00000549314 266 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.73□□□□□ -1.65
RIPK2O43353 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.73□□□□□ -1.65
RIPK2O43353 AL121834.1-201ENST00000572284 509 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.73□□□□□ -1.65
RIPK2O43353 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.73□□□□□ -1.65
RIPK2O43353 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.73□□□□□ -1.65
RIPK2O43353 AC020910.3-201ENST00000603701 874 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 AC073137.1-201ENST00000605636 634 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.73□□□□□ -1.65
RIPK2O43353 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 SNX18P1Y-201ENST00000616231 511 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RIPK2O43353 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
RIPK2O43353 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RIPK2O43353 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RIPK2O43353 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
RIPK2O43353 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RIPK2O43353 AC105074.1-201ENST00000623380 3095 ntBASIC4.73□□□□□ -1.65
RIPK2O43353 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RIPK2O43353 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RIPK2O43353 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RIPK2O43353 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RIPK2O43353 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RIPK2O43353 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.72□□□□□ -1.65
RIPK2O43353 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.72□□□□□ -1.65
RIPK2O43353 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RIPK2O43353 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.72□□□□□ -1.65
RIPK2O43353 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RIPK2O43353 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RIPK2O43353 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RIPK2O43353 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.72□□□□□ -1.65
RIPK2O43353 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RIPK2O43353 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RIPK2O43353 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
RIPK2O43353 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RIPK2O43353 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RIPK2O43353 RNU6-564P-201ENST00000410983 104 ntBASIC4.72□□□□□ -1.65
RIPK2O43353 AC114755.2-201ENST00000413520 361 ntBASIC4.72□□□□□ -1.65
RIPK2O43353 OR2X1P-201ENST00000421144 687 ntBASIC4.72□□□□□ -1.65
RIPK2O43353 SKP1P3-201ENST00000429280 487 ntBASIC4.72□□□□□ -1.65
RIPK2O43353 SLC25A18P1-201ENST00000449385 454 ntBASIC4.72□□□□□ -1.65
RIPK2O43353 AC090142.1-201ENST00000465776 462 ntBASIC4.72□□□□□ -1.65
RIPK2O43353 AC090114.3-201ENST00000479267 829 ntBASIC4.72□□□□□ -1.65
RIPK2O43353 RNU1-6P-201ENST00000516290 144 ntBASIC4.72□□□□□ -1.65
RIPK2O43353 AC008694.2-201ENST00000517591 306 ntBASIC4.72□□□□□ -1.65
RIPK2O43353 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.72□□□□□ -1.65
RIPK2O43353 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RIPK2O43353 AC133555.2-201ENST00000550213 292 ntBASIC4.72□□□□□ -1.65
RIPK2O43353 EIF1AXP2-201ENST00000555940 413 ntBASIC4.72□□□□□ -1.65
RIPK2O43353 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RIPK2O43353 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.72□□□□□ -1.65
RIPK2O43353 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.72□□□□□ -1.65
RIPK2O43353 AL096803.3-201ENST00000609032 532 ntBASIC4.72□□□□□ -1.65
RIPK2O43353 AL023881.1-201ENST00000621088 301 ntBASIC4.72□□□□□ -1.65
RIPK2O43353 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms