Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC022467.1-201ENST00000614738 749 ntBASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 AC005753.1-201ENST00000623837 618 ntBASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 AC099667.1-201ENST00000624222 469 ntBASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 AC090132.1-201ENST00000524071 1480 ntBASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 OR7E11P-202ENST00000642027 1491 ntBASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 MFSD8-227ENST00000641393 4069 ntBASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
VPS9D1Q9Y2B5 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 UQCRC2P1-201ENST00000417777 1332 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AL161891.1-201ENST00000621575 4636 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 OR51A10P-201ENST00000307165 937 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AL139276.1-201ENST00000311910 1001 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 RNA5SP463-201ENST00000363030 120 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 Y_RNA.276-201ENST00000364732 109 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 RNU6-338P-201ENST00000383888 105 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 Y_RNA.404-201ENST00000383978 102 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 RNU6-952P-201ENST00000391164 108 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 RNU2-29P-201ENST00000410423 189 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 RNU2-28P-201ENST00000410457 189 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AL591848.1-201ENST00000413092 322 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 RPS6P23-201ENST00000413224 722 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 PRELID3BP11-201ENST00000414230 479 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AL138787.1-202ENST00000437804 898 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 TXNP5-201ENST00000441043 315 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 RPS29P15-201ENST00000458329 171 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 RPS23P3-201ENST00000470993 430 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 Y_RNA.715-201ENST00000517082 110 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 MTND4P7-201ENST00000523876 130 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 NUTF2P2-201ENST00000551207 384 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AC006254.3-201ENST00000603353 884 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AL021918.1-201ENST00000603933 236 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AL136097.3-201ENST00000611097 505 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 SDR42E1P1-201ENST00000611327 477 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 uc_338.34-201ENST00000617467 174 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 MIR6761-201ENST00000617899 72 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AL451054.1-201ENST00000621770 772 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AC005034.3-201ENST00000604845 1747 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AC012213.2-201ENST00000562917 4597 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 MARK2P10-201ENST00000454959 1437 ntBASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VPS9D1Q9Y2B5 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.59□□□□□ -1.19
VPS9D1Q9Y2B5 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
VPS9D1Q9Y2B5 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
VPS9D1Q9Y2B5 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
VPS9D1Q9Y2B5 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.59□□□□□ -1.19
VPS9D1Q9Y2B5 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.59□□□□□ -1.19
VPS9D1Q9Y2B5 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
VPS9D1Q9Y2B5 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.59□□□□□ -1.19
VPS9D1Q9Y2B5 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
VPS9D1Q9Y2B5 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
VPS9D1Q9Y2B5 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms