Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ECHDC3Q96DC8 NEAT1-202ENST00000501122 22743 ntBASIC4.6□□□□□ -1.67
ECHDC3Q96DC8 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.6□□□□□ -1.67
ECHDC3Q96DC8 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
ECHDC3Q96DC8 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
ECHDC3Q96DC8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 UBBP2-201ENST00000376781 231 ntBASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 Z74021.1-201ENST00000423610 407 ntBASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 HMGB3P9-201ENST00000441799 583 ntBASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 H2AFZP6-201ENST00000444403 394 ntBASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 AL355852.1-201ENST00000454081 1771 ntBASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 AL133244.1-201ENST00000456007 258 ntBASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 CYCSP34-201ENST00000458172 304 ntBASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 AC093720.1-201ENST00000505681 714 ntBASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 RNF138P2-201ENST00000603490 592 ntBASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 AL137246.1-201ENST00000607072 977 ntBASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 MIR6748-201ENST00000610433 71 ntBASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 AL136295.6-201ENST00000610486 658 ntBASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 AL133243.1-201ENST00000614487 366 ntBASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 AC015871.5-202ENST00000623252 701 ntBASIC4.59□□□□□ -1.67
ECHDC3Q96DC8 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
ECHDC3Q96DC8 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.59□□□□□ -1.68
ECHDC3Q96DC8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
ECHDC3Q96DC8 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 CPHL1P-201ENST00000461341 3407 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 OR51H2P-202ENST00000641424 3046 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 MIR921-201ENST00000401133 56 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 EIF4A1P1-201ENST00000420241 934 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 RAD23BP1-201ENST00000421404 1227 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 AL590609.2-201ENST00000421430 368 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 CNOT7P1-201ENST00000429006 852 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 MTND6P18-201ENST00000439477 513 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 RPS26P2-201ENST00000440331 348 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 ARL2BPP10-201ENST00000446487 531 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 AL591473.1-201ENST00000464297 313 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 RN7SL459P-201ENST00000481078 302 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 AC138938.1-201ENST00000515431 782 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 AC115989.2-201ENST00000578640 563 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 MIR4715-201ENST00000584117 79 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 RPL12P25-202ENST00000598100 674 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 AC093765.1-201ENST00000603758 881 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 COX6CP4-201ENST00000605798 228 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 RAD17P1-201ENST00000418130 2042 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 SALL4P2-201ENST00000423288 2910 ntBASIC4.58□□□□□ -1.68
ECHDC3Q96DC8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 LINC00622-201ENST00000562811 1570 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 VN2R3P-201ENST00000422626 1412 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 MTCO1P22-201ENST00000604619 1360 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms