Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COPB1P53618 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
COPB1P53618 LRRC37BP1-201ENST00000398851 714 ntBASIC5.52□□□□□ -1.53
COPB1P53618 RNU4-34P-201ENST00000410431 124 ntBASIC5.52□□□□□ -1.53
COPB1P53618 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.52□□□□□ -1.53
COPB1P53618 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.52□□□□□ -1.53
COPB1P53618 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.52□□□□□ -1.53
COPB1P53618 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.52□□□□□ -1.53
COPB1P53618 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
COPB1P53618 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.52□□□□□ -1.53
COPB1P53618 OR10R1P-201ENST00000441524 1141 ntBASIC5.52□□□□□ -1.53
COPB1P53618 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.52□□□□□ -1.53
COPB1P53618 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.52□□□□□ -1.53
COPB1P53618 AL591719.1-201ENST00000444669 744 ntBASIC5.52□□□□□ -1.53
COPB1P53618 HMGB1P4-201ENST00000455362 567 ntBASIC5.52□□□□□ -1.53
COPB1P53618 GYG1P1-201ENST00000460864 698 ntBASIC5.52□□□□□ -1.53
COPB1P53618 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.52□□□□□ -1.53
COPB1P53618 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.52□□□□□ -1.53
COPB1P53618 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.52□□□□□ -1.53
COPB1P53618 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.52□□□□□ -1.53
COPB1P53618 RNA5SP249-201ENST00000516127 99 ntBASIC5.52□□□□□ -1.53
COPB1P53618 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COPB1P53618 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.52□□□□□ -1.53
COPB1P53618 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.52□□□□□ -1.53
COPB1P53618 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COPB1P53618 MTCYBP23-201ENST00000558717 1102 ntBASIC5.52□□□□□ -1.53
COPB1P53618 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.52□□□□□ -1.53
COPB1P53618 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.52□□□□□ -1.53
COPB1P53618 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.52□□□□□ -1.53
COPB1P53618 NIFKP6-201ENST00000598115 845 ntBASIC5.52□□□□□ -1.53
COPB1P53618 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.52□□□□□ -1.53
COPB1P53618 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
COPB1P53618 AC093783.1-201ENST00000612976 329 ntBASIC5.52□□□□□ -1.53
COPB1P53618 AC008115.4-201ENST00000619780 775 ntBASIC5.52□□□□□ -1.53
COPB1P53618 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.52□□□□□ -1.53
COPB1P53618 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COPB1P53618 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
COPB1P53618 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.52□□□□□ -1.53
COPB1P53618 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COPB1P53618 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.52□□□□□ -1.53
COPB1P53618 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COPB1P53618 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COPB1P53618 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COPB1P53618 AC015813.6-201ENST00000624409 5808 ntBASIC5.52□□□□□ -1.53
COPB1P53618 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.52□□□□□ -1.53
COPB1P53618 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COPB1P53618 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COPB1P53618 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COPB1P53618 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.51□□□□□ -1.53
COPB1P53618 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.51□□□□□ -1.53
COPB1P53618 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
COPB1P53618 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COPB1P53618 RNA5SP183-201ENST00000362452 119 ntBASIC5.51□□□□□ -1.53
COPB1P53618 U3.2-201ENST00000362981 210 ntBASIC5.51□□□□□ -1.53
COPB1P53618 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COPB1P53618 GAPDHP15-201ENST00000398586 975 ntBASIC5.51□□□□□ -1.53
COPB1P53618 SNORA77-201ENST00000408716 125 ntBASIC5.51□□□□□ -1.53
COPB1P53618 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.51□□□□□ -1.53
COPB1P53618 TMBIM7P-201ENST00000418074 855 ntBASIC5.51□□□□□ -1.53
COPB1P53618 MTCO2P21-201ENST00000419780 677 ntBASIC5.51□□□□□ -1.53
COPB1P53618 AC108075.1-201ENST00000424692 529 ntBASIC5.51□□□□□ -1.53
COPB1P53618 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.51□□□□□ -1.53
COPB1P53618 FTLP19-201ENST00000433300 394 ntBASIC5.51□□□□□ -1.53
COPB1P53618 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.51□□□□□ -1.53
COPB1P53618 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.51□□□□□ -1.53
COPB1P53618 RPL6P5-201ENST00000445678 828 ntBASIC5.51□□□□□ -1.53
COPB1P53618 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.51□□□□□ -1.53
COPB1P53618 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.51□□□□□ -1.53
COPB1P53618 AC096992.1-201ENST00000459808 709 ntBASIC5.51□□□□□ -1.53
COPB1P53618 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.51□□□□□ -1.53
COPB1P53618 MTCO3P35-201ENST00000485582 781 ntBASIC5.51□□□□□ -1.53
COPB1P53618 TPT1P3-201ENST00000492841 512 ntBASIC5.51□□□□□ -1.53
COPB1P53618 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.51□□□□□ -1.53
COPB1P53618 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COPB1P53618 RNU6-311P-201ENST00000516224 102 ntBASIC5.51□□□□□ -1.53
COPB1P53618 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.51□□□□□ -1.53
COPB1P53618 AC012339.2-201ENST00000523996 453 ntBASIC5.51□□□□□ -1.53
COPB1P53618 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.51□□□□□ -1.53
COPB1P53618 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.51□□□□□ -1.53
COPB1P53618 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COPB1P53618 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.51□□□□□ -1.53
COPB1P53618 AC008751.2-201ENST00000597885 980 ntBASIC5.51□□□□□ -1.53
COPB1P53618 AL035461.2-201ENST00000619201 524 ntBASIC5.51□□□□□ -1.53
COPB1P53618 AC015871.5-202ENST00000623252 701 ntBASIC5.51□□□□□ -1.53
COPB1P53618 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.51□□□□□ -1.53
COPB1P53618 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COPB1P53618 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.51□□□□□ -1.53
COPB1P53618 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.51□□□□□ -1.53
COPB1P53618 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COPB1P53618 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COPB1P53618 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COPB1P53618 AC019072.1-201ENST00000604535 1551 ntBASIC5.5□□□□□ -1.53
COPB1P53618 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
COPB1P53618 PANDAR-201ENST00000629595 1506 ntBASIC5.5□□□□□ -1.53
COPB1P53618 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.5□□□□□ -1.53
COPB1P53618 UBBP2-201ENST00000376781 231 ntBASIC5.5□□□□□ -1.53
COPB1P53618 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.5□□□□□ -1.53
COPB1P53618 AP002784.2-201ENST00000397300 549 ntBASIC5.5□□□□□ -1.53
COPB1P53618 AL078599.1-201ENST00000402075 293 ntBASIC5.5□□□□□ -1.53
COPB1P53618 MTND4P13-201ENST00000402078 1023 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms