Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.16□□□□□ -1.1
NUBP1P53384 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 RASSF2-201ENST00000379376 5282 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
NUBP1P53384 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NUBP1P53384 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
NUBP1P53384 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC8.15□□□□□ -1.1
NUBP1P53384 SP110-215ENST00000540870 2032 ntTSL 2 BASIC8.15□□□□□ -1.1
NUBP1P53384 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC8.15□□□□□ -1.1
NUBP1P53384 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC8.15□□□□□ -1.1
NUBP1P53384 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
NUBP1P53384 EPB41L5-204ENST00000443902 3167 ntTSL 2 BASIC8.15□□□□□ -1.1
NUBP1P53384 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NUBP1P53384 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NUBP1P53384 ZNF45-201ENST00000269973 3898 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
NUBP1P53384 RNA5SP463-201ENST00000363030 120 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 SNORD82-201ENST00000365530 70 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC8.15□□□□□ -1.1
NUBP1P53384 RNU6-22P-201ENST00000384355 107 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 Y_RNA.480-201ENST00000384364 102 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 SNORD115-46-201ENST00000390982 71 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 RNU2-15P-201ENST00000410692 191 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 AC069218.2-201ENST00000411665 344 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 RPS12P5-201ENST00000423449 371 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 PRUNEP1-201ENST00000425846 705 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 AC092423.1-201ENST00000430165 186 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC8.15□□□□□ -1.1
NUBP1P53384 RN7SL414P-201ENST00000469545 294 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 AC135721.1-201ENST00000497954 479 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 HNRNPA1P44-201ENST00000503999 879 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NUBP1P53384 COX7A2P2-201ENST00000505291 250 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 SEPT14P8-201ENST00000508026 178 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 KRT18P54-201ENST00000513396 748 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 CDH12P4-201ENST00000517835 295 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 CDH12P3-201ENST00000517935 295 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 CDH12P1-201ENST00000518435 295 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.15□□□□□ -1.1
NUBP1P53384 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC8.15□□□□□ -1.1
NUBP1P53384 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC8.15□□□□□ -1.1
NUBP1P53384 MIR378H-201ENST00000579966 83 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 AL355816.1-201ENST00000607951 118 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 EDRF1-AS1-207ENST00000610534 706 ntTSL 5 BASIC8.15□□□□□ -1.1
NUBP1P53384 AL161616.1-201ENST00000611867 286 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 AL161637.1-201ENST00000622380 412 ntBASIC8.15□□□□□ -1.1
NUBP1P53384 CELF2-212ENST00000632728 3827 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
NUBP1P53384 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NUBP1P53384 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NUBP1P53384 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
NUBP1P53384 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NUBP1P53384 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
NUBP1P53384 ZNF30-204ENST00000601142 2280 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
NUBP1P53384 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
NUBP1P53384 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC8.15□□□□□ -1.11
NUBP1P53384 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.15□□□□□ -1.11
NUBP1P53384 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.11
NUBP1P53384 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.11
NUBP1P53384 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
NUBP1P53384 TXNRD1-204ENST00000429002 3855 ntTSL 5 BASIC8.15□□□□□ -1.11
NUBP1P53384 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC8.15□□□□□ -1.11
NUBP1P53384 AMPD3-208ENST00000528723 2753 ntTSL 2 BASIC8.15□□□□□ -1.11
NUBP1P53384 SAMMSON-222ENST00000641901 2727 ntBASIC8.15□□□□□ -1.11
NUBP1P53384 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
NUBP1P53384 AP002748.4-201ENST00000419755 3547 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
NUBP1P53384 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.11
NUBP1P53384 ITGA6-206ENST00000442250 3393 ntTSL 5 BASIC8.14□□□□□ -1.11
NUBP1P53384 NRXN3-215ENST00000557594 3381 ntTSL 2 BASIC8.14□□□□□ -1.11
NUBP1P53384 ASNSD1-201ENST00000260952 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
NUBP1P53384 CAPN3-206ENST00000397163 3228 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 AC011369.2-201ENST00000624423 1567 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC8.14□□□□□ -1.11
NUBP1P53384 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.14□□□□□ -1.11
NUBP1P53384 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC8.14□□□□□ -1.11
NUBP1P53384 AC134508.1-201ENST00000570082 2977 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC8.14□□□□□ -1.11
NUBP1P53384 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 AL121835.2-201ENST00000624253 3502 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 Z75746.1-201ENST00000440243 2080 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 HS3ST5-202ENST00000411826 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC8.14□□□□□ -1.11
NUBP1P53384 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 RNU6-1226P-201ENST00000384317 107 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 MIR621-201ENST00000384919 96 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 AC092952.1-201ENST00000397646 1209 ntBASIC8.14□□□□□ -1.11
NUBP1P53384 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
NUBP1P53384 LINCMD1-201ENST00000418518 462 ntTSL 5 BASIC8.14□□□□□ -1.11
NUBP1P53384 PPIAP23-201ENST00000420099 497 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms