Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BRCA2P51587 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
BRCA2P51587 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
BRCA2P51587 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BRCA2P51587 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.62□□□□□ -1.67
BRCA2P51587 GTF2IP8-201ENST00000560687 584 ntBASIC4.62□□□□□ -1.67
BRCA2P51587 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.62□□□□□ -1.67
BRCA2P51587 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BRCA2P51587 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
BRCA2P51587 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
BRCA2P51587 NHS-204ENST00000615422 8860 ntTSL 5 BASIC4.62□□□□□ -1.67
BRCA2P51587 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
BRCA2P51587 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
BRCA2P51587 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BRCA2P51587 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BRCA2P51587 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.62□□□□□ -1.67
BRCA2P51587 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.62□□□□□ -1.67
BRCA2P51587 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.62□□□□□ -1.67
BRCA2P51587 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.62□□□□□ -1.67
BRCA2P51587 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.62□□□□□ -1.67
BRCA2P51587 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.62□□□□□ -1.67
BRCA2P51587 Z98200.1-201ENST00000607298 470 ntBASIC4.62□□□□□ -1.67
BRCA2P51587 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BRCA2P51587 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BRCA2P51587 SNORA74C-2-201ENST00000411179 201 ntBASIC4.62□□□□□ -1.67
BRCA2P51587 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
BRCA2P51587 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.62□□□□□ -1.67
BRCA2P51587 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.62□□□□□ -1.67
BRCA2P51587 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.62□□□□□ -1.67
BRCA2P51587 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
BRCA2P51587 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 RPL7P58-201ENST00000402913 758 ntBASIC4.61□□□□□ -1.67
BRCA2P51587 FCF1P5-201ENST00000406490 482 ntBASIC4.61□□□□□ -1.67
BRCA2P51587 FTH1P9-201ENST00000513251 355 ntBASIC4.61□□□□□ -1.67
BRCA2P51587 AC006064.5-201ENST00000541782 248 ntBASIC4.61□□□□□ -1.67
BRCA2P51587 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.61□□□□□ -1.67
BRCA2P51587 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.61□□□□□ -1.67
BRCA2P51587 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
BRCA2P51587 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 SPATA31D5P-201ENST00000376459 4784 ntBASIC4.61□□□□□ -1.67
BRCA2P51587 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
BRCA2P51587 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
BRCA2P51587 MTND4LP20-201ENST00000402379 270 ntBASIC4.61□□□□□ -1.67
BRCA2P51587 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.61□□□□□ -1.67
BRCA2P51587 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.61□□□□□ -1.67
BRCA2P51587 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.61□□□□□ -1.67
BRCA2P51587 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 AC083899.2-201ENST00000423285 1376 ntBASIC4.61□□□□□ -1.67
BRCA2P51587 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
BRCA2P51587 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.61□□□□□ -1.67
BRCA2P51587 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 DDX18P5-201ENST00000534547 1306 ntBASIC4.61□□□□□ -1.67
BRCA2P51587 TAF1L-201ENST00000242310 6216 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
BRCA2P51587 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.61□□□□□ -1.67
BRCA2P51587 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRCA2P51587 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
BRCA2P51587 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.6□□□□□ -1.67
BRCA2P51587 TRIM60P17-201ENST00000415181 719 ntBASIC4.6□□□□□ -1.67
BRCA2P51587 EIF4HP2-201ENST00000424380 563 ntBASIC4.6□□□□□ -1.67
BRCA2P51587 RPL12P46-201ENST00000436610 195 ntBASIC4.6□□□□□ -1.67
BRCA2P51587 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.6□□□□□ -1.67
BRCA2P51587 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.6□□□□□ -1.67
BRCA2P51587 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.6□□□□□ -1.67
BRCA2P51587 OR8G7P-201ENST00000616658 848 ntBASIC4.6□□□□□ -1.67
BRCA2P51587 NXPH1-205ENST00000602349 1953 ntBASIC4.6□□□□□ -1.67
BRCA2P51587 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.6□□□□□ -1.67
BRCA2P51587 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.6□□□□□ -1.67
BRCA2P51587 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.6□□□□□ -1.67
BRCA2P51587 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.6□□□□□ -1.67
BRCA2P51587 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BRCA2P51587 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BRCA2P51587 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BRCA2P51587 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BRCA2P51587 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.6□□□□□ -1.67
BRCA2P51587 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BRCA2P51587 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.6□□□□□ -1.67
BRCA2P51587 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.6□□□□□ -1.67
BRCA2P51587 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BRCA2P51587 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BRCA2P51587 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.6□□□□□ -1.67
BRCA2P51587 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BRCA2P51587 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BRCA2P51587 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.6□□□□□ -1.67
BRCA2P51587 RPL35AP21-201ENST00000437667 333 ntBASIC4.6□□□□□ -1.67
BRCA2P51587 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.6□□□□□ -1.67
BRCA2P51587 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.6□□□□□ -1.67
BRCA2P51587 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.6□□□□□ -1.67
BRCA2P51587 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms