Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RFC3P40938 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFC3P40938 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFC3P40938 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RFC3P40938 VPS35P1-201ENST00000563400 1518 ntBASIC4.36□□□□□ -1.71
RFC3P40938 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFC3P40938 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.35□□□□□ -1.71
RFC3P40938 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.35□□□□□ -1.71
RFC3P40938 OR52B1P-201ENST00000316506 909 ntBASIC4.35□□□□□ -1.71
RFC3P40938 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFC3P40938 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC3P40938 RNA5SP105-201ENST00000391123 113 ntBASIC4.35□□□□□ -1.71
RFC3P40938 RPS4XP9-201ENST00000405151 780 ntBASIC4.35□□□□□ -1.71
RFC3P40938 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.35□□□□□ -1.71
RFC3P40938 AC016712.1-201ENST00000431088 378 ntBASIC4.35□□□□□ -1.71
RFC3P40938 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC3P40938 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.35□□□□□ -1.71
RFC3P40938 HMGB3P9-201ENST00000441799 583 ntBASIC4.35□□□□□ -1.71
RFC3P40938 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RFC3P40938 NDUFA5P9-201ENST00000472609 340 ntBASIC4.35□□□□□ -1.71
RFC3P40938 CEACAMP10-202ENST00000495431 496 ntBASIC4.35□□□□□ -1.71
RFC3P40938 SCARNA22-201ENST00000503991 125 ntBASIC4.35□□□□□ -1.71
RFC3P40938 HPRT1P1-201ENST00000509498 657 ntBASIC4.35□□□□□ -1.71
RFC3P40938 RNU6-709P-201ENST00000517257 104 ntBASIC4.35□□□□□ -1.71
RFC3P40938 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC3P40938 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC3P40938 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.35□□□□□ -1.71
RFC3P40938 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.35□□□□□ -1.71
RFC3P40938 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RFC3P40938 RN7SL802P-201ENST00000577858 299 ntBASIC4.35□□□□□ -1.71
RFC3P40938 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC3P40938 FAM106CP-201ENST00000582212 507 ntBASIC4.35□□□□□ -1.71
RFC3P40938 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.35□□□□□ -1.71
RFC3P40938 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFC3P40938 MIR6758-201ENST00000620653 63 ntBASIC4.35□□□□□ -1.71
RFC3P40938 AC012414.7-202ENST00000622705 1090 ntBASIC4.35□□□□□ -1.71
RFC3P40938 AC021106.3-201ENST00000623925 531 ntBASIC4.35□□□□□ -1.71
RFC3P40938 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.35□□□□□ -1.71
RFC3P40938 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFC3P40938 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFC3P40938 HSPA8P17-201ENST00000427029 1382 ntBASIC4.35□□□□□ -1.71
RFC3P40938 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RFC3P40938 VN2R3P-201ENST00000422626 1412 ntBASIC4.35□□□□□ -1.71
RFC3P40938 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFC3P40938 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFC3P40938 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFC3P40938 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.35□□□□□ -1.71
RFC3P40938 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RFC3P40938 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RFC3P40938 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RFC3P40938 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.34□□□□□ -1.71
RFC3P40938 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
RFC3P40938 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RFC3P40938 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RFC3P40938 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RFC3P40938 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.34□□□□□ -1.71
RFC3P40938 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
RFC3P40938 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
RFC3P40938 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RFC3P40938 AC126755.2-208ENST00000327792 462 ntBASIC4.34□□□□□ -1.71
RFC3P40938 AC138969.1-213ENST00000331436 462 ntBASIC4.34□□□□□ -1.71
RFC3P40938 SNORA68.2-201ENST00000391263 128 ntBASIC4.34□□□□□ -1.71
RFC3P40938 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RFC3P40938 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
RFC3P40938 C4BPAP2-201ENST00000428434 478 ntBASIC4.34□□□□□ -1.71
RFC3P40938 AC092162.1-201ENST00000432828 434 ntBASIC4.34□□□□□ -1.71
RFC3P40938 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.34□□□□□ -1.71
RFC3P40938 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.34□□□□□ -1.71
RFC3P40938 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.34□□□□□ -1.71
RFC3P40938 snoU13.1-201ENST00000459157 104 ntBASIC4.34□□□□□ -1.71
RFC3P40938 RN7SL558P-201ENST00000497468 299 ntBASIC4.34□□□□□ -1.71
RFC3P40938 ENPP7P9-201ENST00000514456 627 ntBASIC4.34□□□□□ -1.71
RFC3P40938 RN7SKP92-201ENST00000517266 244 ntBASIC4.34□□□□□ -1.71
RFC3P40938 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.34□□□□□ -1.71
RFC3P40938 BUD31P1-201ENST00000521828 359 ntBASIC4.34□□□□□ -1.71
RFC3P40938 AC107918.3-201ENST00000533272 382 ntBASIC4.34□□□□□ -1.71
RFC3P40938 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
RFC3P40938 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.34□□□□□ -1.71
RFC3P40938 GLRXP2-201ENST00000555594 321 ntBASIC4.34□□□□□ -1.71
RFC3P40938 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.34□□□□□ -1.71
RFC3P40938 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.34□□□□□ -1.71
RFC3P40938 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.34□□□□□ -1.71
RFC3P40938 MIR5699-201ENST00000578903 90 ntBASIC4.34□□□□□ -1.71
RFC3P40938 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RFC3P40938 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.34□□□□□ -1.71
RFC3P40938 AC068790.7-201ENST00000602347 528 ntBASIC4.34□□□□□ -1.71
RFC3P40938 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.34□□□□□ -1.71
RFC3P40938 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.34□□□□□ -1.71
RFC3P40938 AC097505.1-201ENST00000610199 565 ntBASIC4.34□□□□□ -1.71
RFC3P40938 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.34□□□□□ -1.71
RFC3P40938 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.34□□□□□ -1.71
RFC3P40938 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RFC3P40938 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
RFC3P40938 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RFC3P40938 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
RFC3P40938 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.33□□□□□ -1.72
RFC3P40938 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.33□□□□□ -1.72
RFC3P40938 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.33□□□□□ -1.72
RFC3P40938 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
RFC3P40938 AL132640.2-201ENST00000559968 1698 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms