Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 RNU6-1143P-201ENST00000516125 104 ntBASIC8.23□□□□□ -1.09
PTPREP23469 RNU6-150P-201ENST00000516237 95 ntBASIC8.23□□□□□ -1.09
PTPREP23469 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC8.23□□□□□ -1.09
PTPREP23469 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC8.23□□□□□ -1.09
PTPREP23469 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC8.23□□□□□ -1.09
PTPREP23469 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC8.23□□□□□ -1.09
PTPREP23469 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC8.23□□□□□ -1.09
PTPREP23469 AC023310.2-201ENST00000553844 547 ntBASIC8.23□□□□□ -1.09
PTPREP23469 AL389895.1-201ENST00000554127 252 ntBASIC8.23□□□□□ -1.09
PTPREP23469 TVP23CP2-201ENST00000571473 623 ntBASIC8.23□□□□□ -1.09
PTPREP23469 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC8.23□□□□□ -1.09
PTPREP23469 AC100812.1-201ENST00000607622 580 ntBASIC8.23□□□□□ -1.09
PTPREP23469 AL121809.2-201ENST00000613169 341 ntBASIC8.23□□□□□ -1.09
PTPREP23469 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTPREP23469 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PTPREP23469 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTPREP23469 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.23□□□□□ -1.09
PTPREP23469 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTPREP23469 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTPREP23469 ZNF734P-201ENST00000419494 1534 ntBASIC8.23□□□□□ -1.09
PTPREP23469 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTPREP23469 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
PTPREP23469 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTPREP23469 NUP58P1-201ENST00000502546 1738 ntBASIC8.23□□□□□ -1.09
PTPREP23469 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.23□□□□□ -1.09
PTPREP23469 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PTPREP23469 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
PTPREP23469 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PTPREP23469 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC8.22□□□□□ -1.09
PTPREP23469 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PTPREP23469 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC8.22□□□□□ -1.09
PTPREP23469 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC8.22□□□□□ -1.09
PTPREP23469 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PTPREP23469 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC8.22□□□□□ -1.09
PTPREP23469 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC8.22□□□□□ -1.09
PTPREP23469 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.22□□□□□ -1.09
PTPREP23469 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PTPREP23469 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
PTPREP23469 SPATA31C2-201ENST00000324915 3777 ntBASIC8.22□□□□□ -1.09
PTPREP23469 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PTPREP23469 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.22□□□□□ -1.09
PTPREP23469 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PTPREP23469 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PTPREP23469 Y_RNA.25-201ENST00000362528 102 ntBASIC8.22□□□□□ -1.09
PTPREP23469 Y_RNA.339-201ENST00000365325 102 ntBASIC8.22□□□□□ -1.09
PTPREP23469 MIR1204-201ENST00000408388 67 ntBASIC8.22□□□□□ -1.09
PTPREP23469 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC8.22□□□□□ -1.09
PTPREP23469 AC007562.1-201ENST00000421819 517 ntBASIC8.22□□□□□ -1.09
PTPREP23469 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC8.22□□□□□ -1.09
PTPREP23469 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC8.22□□□□□ -1.09
PTPREP23469 RPS15AP9-201ENST00000439856 381 ntBASIC8.22□□□□□ -1.09
PTPREP23469 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC8.22□□□□□ -1.09
PTPREP23469 AL136380.1-201ENST00000447970 162 ntBASIC8.22□□□□□ -1.09
PTPREP23469 MTCO1P27-201ENST00000448269 226 ntBASIC8.22□□□□□ -1.09
PTPREP23469 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC8.22□□□□□ -1.09
PTPREP23469 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC8.22□□□□□ -1.09
PTPREP23469 AP003385.3-201ENST00000472498 287 ntBASIC8.22□□□□□ -1.09
PTPREP23469 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
PTPREP23469 AC114324.2-202ENST00000503812 134 ntBASIC8.22□□□□□ -1.09
PTPREP23469 AC110794.1-201ENST00000505816 425 ntBASIC8.22□□□□□ -1.09
PTPREP23469 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC8.22□□□□□ -1.09
PTPREP23469 AC098591.2-201ENST00000510152 315 ntBASIC8.22□□□□□ -1.09
PTPREP23469 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC8.22□□□□□ -1.09
PTPREP23469 RNU6-1003P-201ENST00000517099 105 ntBASIC8.22□□□□□ -1.09
PTPREP23469 HMGB1P19-201ENST00000517578 577 ntBASIC8.22□□□□□ -1.09
PTPREP23469 IGHVIII-26-1-201ENST00000520387 250 ntBASIC8.22□□□□□ -1.09
PTPREP23469 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC8.22□□□□□ -1.09
PTPREP23469 MTCO3P23-201ENST00000561363 289 ntBASIC8.22□□□□□ -1.09
PTPREP23469 HMGB1P6-201ENST00000569046 646 ntBASIC8.22□□□□□ -1.09
PTPREP23469 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC8.22□□□□□ -1.09
PTPREP23469 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC8.22□□□□□ -1.09
PTPREP23469 AL592436.1-201ENST00000605135 558 ntBASIC8.22□□□□□ -1.09
PTPREP23469 AC096861.1-201ENST00000616652 240 ntBASIC8.22□□□□□ -1.09
PTPREP23469 SNX18P12-201ENST00000624821 759 ntBASIC8.22□□□□□ -1.09
PTPREP23469 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC8.22□□□□□ -1.09
PTPREP23469 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
PTPREP23469 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC8.22□□□□□ -1.09
PTPREP23469 AC138915.4-201ENST00000565549 4147 ntBASIC8.22□□□□□ -1.09
PTPREP23469 AC022507.1-201ENST00000548349 1505 ntBASIC8.22□□□□□ -1.09
PTPREP23469 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC8.22□□□□□ -1.09
PTPREP23469 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
PTPREP23469 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PTPREP23469 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PTPREP23469 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
PTPREP23469 MFSD4BP1-201ENST00000513330 1552 ntBASIC8.22□□□□□ -1.09
PTPREP23469 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
PTPREP23469 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC8.22□□□□□ -1.09
PTPREP23469 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.21□□□□□ -1.09
PTPREP23469 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC8.21□□□□□ -1.09
PTPREP23469 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
PTPREP23469 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PTPREP23469 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PTPREP23469 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC8.21□□□□□ -1.09
PTPREP23469 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
PTPREP23469 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
PTPREP23469 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
PTPREP23469 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.21□□□□□ -1.1
PTPREP23469 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
PTPREP23469 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PTPREP23469 RNA5SP472-201ENST00000363868 119 ntBASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms