Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC073069.1-201ENST00000428657 441 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 AC093414.1-201ENST00000434712 514 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 AL645937.3-201ENST00000453647 936 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 MRPS33P2-201ENST00000507850 322 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 RNA5SP249-201ENST00000516127 99 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 SNORA74C-1-201ENST00000580726 201 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 AC010424.2-201ENST00000607594 443 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 CR589904.2-201ENST00000612533 440 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 AC020658.4-201ENST00000613987 684 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 CASC19-204ENST00000641001 2055 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 DDX18P5-201ENST00000534547 1306 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 SNORA62.2-201ENST00000364672 152 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 RNU6-40P-201ENST00000384254 107 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 RN7SKP125-201ENST00000410481 302 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 GSTM3P2-201ENST00000412746 530 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 CHEK2P3-201ENST00000416118 248 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 MTND4P11-201ENST00000417020 1058 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 PPIAP13-201ENST00000434706 478 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 AL031663.1-201ENST00000437445 219 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 PRPF38AP2-201ENST00000438179 851 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 CBX1P4-201ENST00000439415 457 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 HMGB3P9-201ENST00000441799 583 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 TRY2P-201ENST00000448860 689 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 SLC25A18P1-201ENST00000449385 454 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 RPL7P61-201ENST00000451721 751 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 IFNWP4-201ENST00000453148 294 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 AC006511.1-201ENST00000470614 315 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 AC110775.1-201ENST00000513721 462 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 CYCSP40-201ENST00000575927 294 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 KATNBL1P1-201ENST00000605192 748 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 MIR6730-201ENST00000622213 67 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 AC006453.5-201ENST00000636451 619 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 OR2L1P-202ENST00000641567 1023 ntBASIC4.92□□□□□ -1.62
HLA-DPA1P20036 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
HLA-DPA1P20036 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 RNU6-317P-201ENST00000384031 107 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 RPL31P52-201ENST00000407532 367 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 CTSL3P-202ENST00000412179 788 ntBASIC4.91□□□□□ -1.62
HLA-DPA1P20036 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DPA1P20036 PSMD10P3-201ENST00000437000 448 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms